RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PAGE1O75459 146 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 MSNP26038 577 aaKnown RBP20.78■□□□□ 0.92
USP53-203ENST00000507597 MIPP30301 263 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 SCAPQ12770 1279 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 MPP7Q5T2T1 576 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 NUDT18Q6ZVK8 323 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 MAP7D3Q8IWC1 876 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 TPCN2Q8NHX9 752 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 KIAA1524Q8TCG1 905 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 DDI1Q8WTU0 396 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 TEKT4Q8WW24 435 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 LACRTQ9GZZ8 138 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 LINC00597Q9H2U6 94 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 EBF3Q9H4W6 596 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 STIM2Q9P246 746 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 PCSK1NQ9UHG2 260 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 GUCA1BQ9UMX6 200 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 HELZP42694 1942 aaKnown RBP20.78■□□□□ 0.92
USP53-203ENST00000507597 MACROD2A1Z1Q3 448 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 RCCD1A6NED2 376 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 BUB1O43683 1085 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 ADH5P11766 374 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 TACR2P21452 398 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 ATXN1P54253 815 aaKnown RBP20.77■□□□□ 0.92
USP53-203ENST00000507597 NRG1Q02297 640 aaPredicted RBP20.77■□□□□ 0.92
USP53-203ENST00000507597 ZNF252P-AS1Q0IIN9 211 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 DHCR24Q15392 516 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 ANO4Q32M45 955 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 HS1BP3Q53T59 392 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 MS4A13Q5J8X5 152 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 ZFYVE27Q5T4F4 411 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 HJURPQ8NCD3 748 aaPredicted RBP20.77■□□□□ 0.92
USP53-203ENST00000507597 ST13P5Q8NFI4 369 aaPredicted RBP20.77■□□□□ 0.92
USP53-203ENST00000507597 WBP2Q969T9 261 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 SHDQ96IW2 340 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 ZFYVE19Q96K21 471 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 EPAS1Q99814 870 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 KCNF1Q9H3M0 494 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 MARK1Q9P0L2 795 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 CALCOCO1Q9P1Z2 691 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 FZD10Q9ULW2 581 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 HS3ST4Q9Y661 456 aa20.77■□□□□ 0.92
USP53-203ENST00000507597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.76■□□□□ 0.91
USP53-203ENST00000507597 OXCT1P55809 520 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 LRRC38Q5VT99 294 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 RAP1GAP2Q684P5 730 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 TRIM68Q6AZZ1 485 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 TPGS1Q6ZTW0 290 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 POLNQ7Z5Q5 900 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 RHOT1Q8IXI2 618 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 LGI2Q8N0V4 545 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 RIN3Q8TB24 985 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 BBS2Q9BXC9 721 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 ADAM33Q9BZ11 813 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 DDX56Q9NY93 547 aaKnown RBP20.76■□□□□ 0.91
USP53-203ENST00000507597 WNT16Q9UBV4 365 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 OR12D3Q9UGF7 316 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 FBXL21Q9UKT6 434 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 AP4E1Q9UPM8 1137 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 ALG6Q9Y672 507 aa20.76■□□□□ 0.91
USP53-203ENST00000507597 XIRP2A4UGR9 3374 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 MAN2B1O00754 1011 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 BUB1BO60566 1050 aaPredicted RBP20.75■□□□□ 0.91
USP53-203ENST00000507597 ALADP13716 330 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 L1CAMP32004 1257 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 PRKCQQ04759 706 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 AUHQ13825 339 aaKnown RBP20.75■□□□□ 0.91
USP53-203ENST00000507597 E2F5Q15329 346 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 LY6G5CQ5SRR4 150 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 PIK3R6Q5UE93 754 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 RHBDF2Q6PJF5 856 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 RALGPS2Q86X27 583 aaPredicted RBP20.75■□□□□ 0.91
USP53-203ENST00000507597 RPRD1AQ96P16 312 aaPredicted RBP20.75■□□□□ 0.91
USP53-203ENST00000507597 SLC2A11Q9BYW1 496 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 DHX35Q9H5Z1 703 aaKnown RBP20.75■□□□□ 0.91
USP53-203ENST00000507597 ZWILCHQ9H900 591 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 LZTFL1Q9NQ48 299 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 AMFRQ9UKV5 643 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 TFR2Q9UP52 801 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 DUSP10Q9Y6W6 482 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 EYSQ5T1H1 3165 aa20.75■□□□□ 0.91
USP53-203ENST00000507597 SCAMP3O14828 347 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 HOXC11O43248 304 aaPredicted RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 CYP17A1P05093 508 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 ARSAP15289 507 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 COMTP21964 271 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 ARL4AP40617 200 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 EIF2DP41214 584 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 SLC44A4Q53GD3 710 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 FAM133BQ5BKY9 247 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 SUGP1Q8IWZ8 645 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 CCDC185Q8N715 623 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 TRIM58Q8NG06 486 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 HPS4Q9NQG7 708 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 PPARGC1AQ9UBK2 798 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 VANGL2Q9ULK5 521 aa20.74■□□□□ 0.91
USP53-203ENST00000507597 MRPS17Q9Y2R5 130 aaKnown RBP20.74■□□□□ 0.91
USP53-203ENST00000507597 COL6A3P12111 3177 aa20.73■□□□□ 0.91
USP53-203ENST00000507597 GOLGA6L7A0A1B0GV03 622 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms