RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 DEPDC1BQ8WUY9 529 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 JADE3Q92613 823 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 RRP36Q96EU6 259 aaKnown RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 RBM18Q96H35 190 aaKnown RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 SUCLG2Q96I99 432 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 AGAP3Q96P47 875 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 DESI2Q9BSY9 194 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 UTP14AQ9BVJ6 771 aaKnown RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 SORBS1Q9BX66 1292 aaKnown RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 NOD2Q9HC29 1040 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 ERVK-5Q9HDB9 667 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 TCF7L2Q9NQB0 619 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 SEMA4GQ9NTN9 838 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 CCM2LQ9NUG4 571 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 FOXJ2Q9P0K8 574 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 GRHPRQ9UBQ7 328 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 DPP7Q9UHL4 492 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 MTUS1Q9ULD2 1270 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 TBX20Q9UMR3 447 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 STXBP5LQ9Y2K9 1186 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA9Q9Y5G4 932 aaKnown RBP3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA8Q9Y5G5 932 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA7Q9Y5G6 932 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA6Q9Y5G7 932 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA3Q9Y5H0 932 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCDHGA2Q9Y5H1 932 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 GPR45Q9Y5Y3 372 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 SESN1Q9Y6P5 492 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 PNPLA7Q6ZV29 1317 aa3.85□□□□□ -1.79
HMGB3P15-201ENST00000507326 RNF103-CHMP3A0A140T963 221 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 A0A1W2PPL8 197 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CTAGE9A4FU28 777 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 KRTAP29-1A8MX34 341 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 TMCO5BA8MYB1 307 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ISM1B1AKI9 464 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 M0QX08 132 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 RNF103O00237 685 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ACKR2O00590 384 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SLC7A4O43246 635 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 NCK2O43639 380 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CEP104O60308 925 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 EXOC3O60645 756 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 KLHL41O60662 606 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 KERAO60938 352 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 NDUFS2O75306 463 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 DAB1O75553 588 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 C1QL1O75973 258 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CCNDBP1O95273 360 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 YEATS4O95619 227 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 STAMBPO95630 424 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 APBB3O95704 486 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 RAP2AP10114 183 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 TOP1P11387 765 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 PCP11498 1178 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 PORP16435 677 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 IL11P20809 199 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 NFKBIAP25963 317 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 EEF1GP26641 437 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 PDIA3P30101 505 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SERPINF1P36955 418 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ABCG1P45844 678 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 AARSP49588 968 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CACNA2D1P54289 1103 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 RRP1P56182 461 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 AP2B1P63010 937 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 HSD11B2P80365 405 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ARF5P84085 180 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 NHLH1Q02575 133 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 DEUP1Q05D60 604 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ZNF543Q08ER8 600 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 FOXF2Q12947 444 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 STK4Q13043 487 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CUL4BQ13620 913 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SLC12A1Q13621 1099 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ACVR2BQ13705 512 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ZRSR1Q15695 479 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 TIGD6Q17RP2 521 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ALG11Q2TAA5 492 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CEP55Q53EZ4 464 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 AFMIDQ63HM1 303 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 KRT80Q6KB66 452 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 KLHL17Q6TDP4 642 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 GATAD2AQ86YP4 633 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SRRM1Q8IYB3 904 aaKnown RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 DPP10Q8N608 796 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CCDC150Q8NCX0 1101 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ZNF540Q8NDQ6 660 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CCDC148Q8NFR7 591 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 OR7D4Q8NG98 312 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SETD6Q8TBK2 473 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 CCDC110Q8TBZ0 833 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ZFAND2BQ8WV99 257 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 LMBR1Q8WVP7 490 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 RIN2Q8WYP3 895 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 SHC3Q92529 594 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 FAM162AQ96A26 154 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 ZUFSPQ96AP4 578 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 COA7Q96BR5 231 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 BOD1Q96IK1 185 aa3.84□□□□□ -1.79
HMGB3P15-201ENST00000507326 COG8Q96MW5 612 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms