RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ACTR5Q9H9F9 607 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 TRHDEQ9UKU6 1024 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 PATJQ8NI35 1801 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 AP3B1O00203 1094 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 IGLV3-25P01717 112 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 INHAP05111 366 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 SELPP16109 830 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 CACNA2D1P54289 1103 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 PITX1P78337 314 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 CAP1Q01518 475 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 NAB1Q13506 487 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 LHX8Q68G74 356 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 SLC26A11Q86WA9 606 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 COLGALT2Q8IYK4 626 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 OR10T2Q8NGX3 314 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 MTBPQ96DY7 904 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 HAPLN3Q96S86 360 aa17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 EBNA1BP2Q99848 306 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-204ENST00000505676 HOXA2O43364 376 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 BANF1O75531 89 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 ASMTLO95671 621 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 ERCC2P18074 760 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 IFNAR2P48551 515 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 PPIDQ08752 370 aaKnown RBP17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 QPCTQ16769 361 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC8BQ6P9F7 803 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 GSDMBQ8TAX9 411 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 HDAC11Q96DB2 347 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 P2RY11Q96G91 374 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 RNF103O00237 685 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 TRIM66O15016 1216 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 TYROBPO43914 113 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 METTL18O95568 372 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 APOEP02649 317 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 VAV1P15498 845 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 CREB1P16220 341 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 CNTFP26441 200 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 MAGEA9P43362 315 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 SERPINB9P50453 376 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 SMARCB1Q12824 385 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC8DQ7L1W4 858 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC6Q86X45 466 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 COLGALT1Q8NBJ5 622 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 PPP1R2P1Q96PQ5 205 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 KDM4CQ9H3R0 1056 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 ARHGEF38Q9NXL2 777 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 FNIP2Q9P278 1114 aa17.8■□□□□ 0.44
TRAPPC11-204ENST00000505676 SYNJ2BP-COX16A0A087WUM0 186 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 KRT37O76014 449 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 MAGEA11P43364 429 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 NRLP54845 237 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 AP1B1Q10567 949 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TTC39BQ5VTQ0 682 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 ITPRIPL1Q6GPH6 555 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TAB3Q8N5C8 712 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 LZTR1Q8N653 840 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 MGARPQ8TDB4 240 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 MZB1Q8WU39 189 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 PPM1EQ8WY54 764 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 C8orf48Q96LL4 319 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TRPV6Q9H1D0 765 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 SMOC2Q9H3U7 446 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 FBXO44Q9H4M3 255 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 PRDM12Q9H4Q4 367 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 COX16Q9P0S2 106 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TTLL3Q9Y4R7 772 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 PCDHA11Q9Y5I1 949 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TCP11X1B4DZS4 312 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 I3L4J1 428 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 FGF10O15520 208 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 PSMD3O43242 534 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 SUN1O94901 812 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 MT-ND3P03897 115 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 CA4P22748 312 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 DNAJB2P25686 324 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 GALNT2Q10471 571 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 IFRD2Q12894 506 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 MPP2Q14168 576 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 SEPT7Q16181 437 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 CLLU1OSQ5K130 101 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 ACBD5Q5T8D3 534 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 BTBD8Q5XKL5 378 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 STEAP4Q687X5 459 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 RTN4RL1Q86UN2 441 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 DQX1Q8TE96 717 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 SIGLEC10Q96LC7 697 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TKTL2Q9H0I9 626 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 TMLHEQ9NVH6 421 aa17.79■□□□□ 0.44
TRAPPC11-204ENST00000505676 OR6C75A6NL08 312 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 IRAK2O43187 625 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 SNX3O60493 162 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 NRG1Q02297 640 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 IFT88Q13099 833 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms