RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 POLNQ7Z5Q5 900 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 MRGPRGQ86SM5 289 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 CCDC105Q8IYK2 499 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 TBC1D3Q8IZP1 549 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 OR4N4Q8N0Y3 316 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 C11orf44Q8N8P7 122 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 MIEF2Q96C03 454 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM89AQ96GI7 184 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 VPS50Q96JG6 964 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 HAPLN3Q96S86 360 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 DCLRE1CQ96SD1 692 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 CD180Q99467 661 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 NRDE2Q9H7Z3 1164 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 KCNK9Q9NPC2 374 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 CFDP1Q9UEE9 299 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 CAMK2AQ9UQM7 478 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 NAALADL1Q9UQQ1 740 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 DRG1Q9Y295 367 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 TMEM5Q9Y2B1 443 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 SH3BP1Q9Y3L3 701 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 USP15Q9Y4E8 981 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 PCDHB7Q9Y5E2 793 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 SNX14Q9Y5W7 946 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 AATKQ6ZMQ8 1374 aa4.26□□□□□ -1.73
TRAPPC13-208ENST00000505553 GOLGA6L10A0A0M3HER8 536 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 KRTAP29-1A8MX34 341 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 TMEM232C9JQI7 657 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 P4HA2O15460 535 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 DKC1O60832 514 aaKnown RBP eCLIP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 CHN1P15882 459 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ACTN2P35609 894 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 GGT5P36269 586 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 MC2RQ01718 297 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 HHEXQ03014 270 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 PTP4A2Q12974 167 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 MTAPQ13126 283 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 BFSP2Q13515 415 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ACVR2BQ13705 512 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 THOC5Q13769 683 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 KCNJ12Q14500 433 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 NAIF1Q69YI7 327 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 PXKQ7Z7A4 578 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ADGRG5Q8IZF4 528 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 D2HGDHQ8N465 521 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 GALNT4Q8N4A0 578 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF808Q8N4W9 903 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF366Q8N895 744 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 NKAIN3Q8N8D7 197 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 Q8NA96 180 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 METTL6Q8TCB7 284 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 TBC1D5Q92609 795 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 USP6NLQ92738 828 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 EXTL1Q92935 676 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM136AQ96C01 138 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 MCRS1Q96EZ8 462 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 FEM1CQ96JP0 617 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ASB2Q96Q27 587 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 OR14A2Q96R54 314 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLF1Q9BQI6 1058 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 STN1Q9H668 368 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 IL21RQ9HBE5 538 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 SH3GLB2Q9NR46 395 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 BEX4Q9NWD9 120 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 NFKBIL1Q9UBC1 381 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 ADD3Q9UEY8 706 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 KCNE5Q9UJ90 142 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 SORCS3Q9UPU3 1222 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 PCDHA10Q9Y5I2 948 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 SNX8Q9Y5X2 465 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 LYVE1Q9Y5Y7 322 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 PSAT1Q9Y617 370 aa4.25□□□□□ -1.73
TRAPPC13-208ENST00000505553 RUSC2Q8N2Y8 1516 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 hCG_1807616A0A1W2PRN6 198 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 A8MVJ9 347 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 GOLGA6L6A8MZA4 724 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 NKX2-8O15522 239 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 HEXIM1O94992 359 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 PORP16435 677 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 EPHA8P29322 1005 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 GRK5P34947 590 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 CDH15P55291 814 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 CREB5Q02930 508 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 CHAF1BQ13112 559 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 CD300EQ496F6 205 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM90A2PQ658T7 463 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC9A4Q6AI14 798 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC22A25Q6T423 547 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 LDLRAD3Q86YD5 345 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 MAPKAPK5Q8IW41 473 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 TNIP2Q8NFZ5 429 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 ATG4AQ8WYN0 398 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms