RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 STILQ15468 1287 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 UGT2A3Q6UWM9 527 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 CES3Q6UWW8 571 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 ZBTB8OSQ8IWT0 167 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 NIM1KQ8IY84 436 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 NME7Q9Y5B8 376 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 DCXO43602 365 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 NCF2P19878 526 aaPredicted RBP12.24□□□□□ -0.45
UBE3D-206ENST00000505226 TPSB2P20231 275 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 LSAMPQ13449 338 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 TRIP10Q15642 601 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 TPSAB1Q15661 275 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 STEAP4Q687X5 459 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 NAPRTQ6XQN6 538 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 KBTBD6Q86V97 674 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 TTC30AQ86WT1 665 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 TNS4Q8IZW8 715 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 MAPK15Q8TD08 544 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 CLEC4CQ8WTT0 213 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 CEP41Q9BYV8 373 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 CXCL16Q9H2A7 254 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 ACSS2Q9NR19 701 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CAPN8A6NHC0 703 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SERPINE1P05121 402 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 STAG3L1P0CL83 205 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CLCN3P51790 818 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 MBTD1Q05BQ5 628 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 OLIG2Q13516 323 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SEMA5AQ13591 1074 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 MXD4Q14582 209 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PDK3Q15120 406 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CASC4Q6P4E1 433 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 LCLAT1Q6UWP7 414 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PLD6Q8N2A8 252 aaKnown RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 NAT14Q8WUY8 206 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CLMNQ96JQ2 1002 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 WRNIP1Q96S55 665 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PPP1R16BQ96T49 567 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 HESX1Q9UBX0 185 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PAPSS1O43252 624 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PGM3O95394 542 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 ITGA2BP08514 1039 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SMIM18P0DKX4 95 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 ALOX15P16050 662 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SESN2P58004 480 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 TBL3Q12788 808 aaKnown RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 TLR1Q15399 786 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SLC9B1Q4ZJI4 515 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CMC1Q7Z7K0 106 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 ST13P4Q8IZP2 240 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 PYROXD2Q8N2H3 581 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 FBXW8Q8N3Y1 598 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 SEPT1Q8WYJ6 367 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 EZH1Q92800 747 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-206ENST00000505226 HPDLQ96IR7 371 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 GCNAQ96QF7 691 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 LGMNQ99538 433 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 ZNF670Q9BS34 389 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 DNAJC28Q9NX36 388 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 COPG2Q9UBF2 871 aa12.23□□□□□ -0.45
UBE3D-206ENST00000505226 MGAT1P26572 445 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 SERPINB6P35237 376 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 GTF2A2P52657 109 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 FOLH1Q04609 750 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 GK3PQ14409 553 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 GOLGA7BQ2TAP0 167 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 MMEL1Q495T6 779 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CCDC28BQ9BUN5 200 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 UBAP1Q9NZ09 502 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 BARX2Q9UMQ3 279 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 INPP5FQ9Y2H2 1132 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 DOCK1Q14185 1865 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 E9PBE3 544 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 DPYSL4O14531 572 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 KLHL41O60662 606 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 GLRA3O75311 464 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 HARS2P49590 506 aaKnown RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 ABCE1P61221 599 aaKnown RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CYS1Q717R9 158 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 TMC7Q7Z402 723 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 ZNF781Q8N8C0 355 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 SIKE1Q9BRV8 207 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 MIS12Q9H081 205 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 DHX35Q9H5Z1 703 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms