RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PPP6R3Q5H9R7 873 aaPredicted RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 C8orf74Q6P047 294 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 WDR93Q6P2C0 686 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 CCDC149Q6ZUS6 474 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 RFX6Q8HWS3 928 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 TP53INP2Q8IXH6 220 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 GPR161Q8N6U8 529 aaKnown RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 NPWQ8N729 165 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 GLIS1Q8NBF1 620 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 CASKIN2Q8WXE0 1202 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 UBXN4Q92575 508 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 MAGOHBQ96A72 148 aaKnown RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 KLF16Q9BXK1 252 aaPredicted RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 CALN1Q9BXU9 219 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 PARD6BQ9BYG5 372 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 LMAN2LQ9H0V9 348 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 PLEKHA4Q9H4M7 779 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 WDCPQ9H6R7 721 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 OLA1Q9NTK5 396 aaKnown RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 HCFC1R1Q9NWW0 138 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 MARCH2Q9P0N8 246 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 RASAL2Q9UJF2 1139 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 ASB3Q9Y575 518 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 HS3ST4Q9Y661 456 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 IGLV3-10A0A075B6K4 115 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 RFXAPO00287 272 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 GFRA2O00451 464 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 CCL16O15467 120 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 KLKB1P03952 638 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 TGM2P21980 687 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 IVDP26440 423 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 CCR1P32246 355 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 GBP1P32455 592 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 ELF1P32519 619 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 CA8P35219 290 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 HCAR3P49019 387 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 KCNQ1P51787 676 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 TBX4P57082 545 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 CYP4F8P98187 520 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 DHX34Q14147 1143 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 VEPH1Q14D04 833 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 PAFAH1B3Q15102 231 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 PRSS36Q5K4E3 855 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 C10orf120Q5SQS8 335 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 HECTD3Q5T447 861 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 STXBP5Q5T5C0 1151 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 DUPD1Q68J44 220 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 CCDC137Q6PK04 289 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 RFX8Q6ZV50 586 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 MAIP1Q8WWC4 291 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 ARNTL2Q8WYA1 636 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 P2RY11Q96G91 374 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 POM121Q96HA1 1249 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 NEUROG2Q9H2A3 272 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 C10orf88Q9H8K7 445 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 GRHL1Q9NZI5 618 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 TRPM5Q9NZQ8 1165 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 STIM2Q9P246 746 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 DNMT3BQ9UBC3 853 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 HBS1LQ9Y450 684 aaKnown RBP10.75□□□□□ -0.69
TPM3-217ENST00000504663 HCFC2Q9Y5Z7 792 aa10.75□□□□□ -0.69
TPM3-217ENST00000504663 GOLGA6L10A0A0M3HER8 536 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 SLC12A8A0AV02 714 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ESYT3A0FGR9 886 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 H3BRJ5 948 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 EEF2KO00418 725 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 APOL1O14791 398 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 PER2O15055 1255 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 STC2O76061 302 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 HEXIM1O94992 359 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 GLP2RO95838 553 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 DESP17661 470 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 GABRR2P28476 465 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 NRLP54845 237 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 GDF10P55107 478 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 TUBB4BP68371 445 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 DR1Q01658 176 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 SNX1Q13596 522 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 PTK6Q13882 451 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 TFDP2Q14188 446 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 SLC5A9Q2M3M2 681 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 C5orf22Q49AR2 442 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
TPM3-217ENST00000504663 MS4A13Q5J8X5 152 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 FAM182AQ5T1J6 154 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ZFYVE27Q5T4F4 411 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 FBXO38Q6PIJ6 1188 aa10.74□□□□□ -0.69
TPM3-217ENST00000504663 ZDHHC24Q6UX98 284 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms