RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 FOXN3O00409 490 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 IRAK2O43187 625 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 THAP12O43422 761 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 TBX4P57082 545 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 OTUD1Q5VV17 481 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 FAM71AQ8IYT1 594 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 C12orf50Q8NA57 414 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 ADAM32Q8TC27 787 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 TMA16Q96EY4 203 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 SPACA7Q96KW9 195 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 SLC2A13Q96QE2 648 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 NUCKS1Q9H1E3 243 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 LHX5Q9H2C1 402 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 NDST4Q9H3R1 872 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 BCCIPQ9P287 314 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 DNAJC12Q9UKB3 198 aa14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 INTS6Q9UL03 887 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-211ENST00000504318 SART1O43290 800 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 MED7O43513 233 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 IGLV3-19P01714 112 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 CYBBP04839 570 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ADRB1P08588 477 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ITPKAP23677 461 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 CD70P32970 193 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 MTIF2P46199 727 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 DHPSP49366 369 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 IRX4P78413 519 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 SKOR2Q2VWA4 1001 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 VWA3BQ502W6 1294 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ARTNQ5T4W7 220 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 OLFML1Q6UWY5 402 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 CYP2U1Q7Z449 544 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 SLC47A2Q86VL8 602 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 UNC45BQ8IWX7 931 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 DDX1Q92499 740 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 SERPINB11Q96P15 392 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 PRMT1Q99873 361 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 EDEM2Q9BV94 578 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 LSM14BQ9BX40 385 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 POPDC2Q9HBU9 364 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ST7Q9NRC1 585 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 ABCB8Q9NUT2 735 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 GGA2Q9UJY4 613 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 CYP8B1Q9UNU6 501 aa14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 TPRP12270 2363 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-211ENST00000504318 PCNX2A6NKB5 2137 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ATXN2Q99700 1313 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 KCNU1A8MYU2 1149 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ZNF217O75362 1048 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ERBB2P04626 1255 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 PABPC1P11940 636 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 CDH5P33151 784 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 RPS24P62847 133 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 CAMK2GQ13555 558 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 PTPN20Q4JDL3 420 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 HSP90AA4PQ58FG1 418 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 CT47A1Q5JQC4 288 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 PPM1JQ5JR12 505 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 KLHDC7AQ5VTJ3 777 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 CDKAL1Q5VV42 579 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 SLC23A3Q6PIS1 610 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 SYT12Q8IV01 421 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 PGBD3Q8N328 593 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 FIBINQ8TAL6 211 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 WFIKKN2Q8TEU8 576 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 PIGKQ92643 395 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 FAM149B1Q96BN6 582 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 CAPN10Q9HC96 672 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ITM2CQ9NQX7 267 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 ASNSD1Q9NWL6 643 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 WSB2Q9NYS7 404 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 FHOD1Q9Y613 1164 aa14.53□□□□□ -0.08
PDLIM7-211ENST00000504318 C10orf142B7Z368 130 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 TIMM44O43615 452 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 TBL1XO60907 577 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 TRUB2O95900 331 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 HLA-EP13747 358 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 HOXD12P35452 270 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 RPL6Q02878 288 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 LMAN2Q12907 356 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 KCNJ12Q14500 433 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 TCP11X2Q5H9J9 407 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 FSCBQ5H9T9 825 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 LYSMD4Q5XG99 296 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 SDE2Q6IQ49 451 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 SLC36A4Q6YBV0 504 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 FAM183BPQ6ZVS7 135 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 CHST9Q7L1S5 443 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 TMPRSS6Q8IU80 811 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 CREBRFQ8IUR6 639 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 PASD1Q8IV76 773 aa14.52□□□□□ -0.09
PDLIM7-211ENST00000504318 C1orf131Q8NDD1 294 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms