RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZNF195O14628 629 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 CASQ2O14958 399 aaPredicted RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 ITM2AO43736 263 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 OPHN1O60890 802 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 IDH3AP50213 366 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 CLCN2P51788 898 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 SH3BGRP55822 239 aaPredicted RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 ASPHQ12797 758 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 FRG1Q14331 258 aaKnown RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 MDH1BQ5I0G3 518 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 PPP1R26Q5T8A7 1209 aaPredicted RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 ZNF772Q68DY9 489 aaPredicted RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 ZCCHC23Q6ZST2 131 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 RFX8Q6ZV50 586 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 UNC93AQ86WB7 457 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 TTC30AQ86WT1 665 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 LINC01465Q8N7H1 131 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 TFB1MQ8WVM0 346 aaKnown RBP15.42■□□□□ 0.06
SNF8-203ENST00000504000 CSPG4P5Q96PW8 444 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 SORT1Q99523 831 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 XPNPEP3Q9NQH7 507 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 DTLQ9NZJ0 730 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 COPG2Q9UBF2 871 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 ADAM28Q9UKQ2 775 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 DERAQ9Y315 318 aa15.42■□□□□ 0.06
SNF8-203ENST00000504000 TPP1O14773 563 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 GJB1P08034 283 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 ITGA2BP08514 1039 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 MX2P20592 715 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 MAGEA12P43365 314 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 CLCN3P51790 818 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 PDE1BQ01064 536 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 GRM2Q14416 872 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 STRADAQ7RTN6 431 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 C12orf29Q8N999 325 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 GSTCDQ8NEC7 633 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 STON2Q8WXE9 905 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 SPATA33Q96N06 139 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 FERMT1Q9BQL6 677 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 AP4E1Q9UPM8 1137 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 USP3Q9Y6I4 520 aa15.41■□□□□ 0.06
SNF8-203ENST00000504000 WDR27A2RRH5 827 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 STK10O94804 968 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 BAG2O95816 211 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 SLC25A27O95847 323 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 PRKCGP05129 697 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 GRIA1P42261 906 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GLUD2P49448 558 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 RGS7P49802 495 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 RPL10AP62906 217 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 DYNC1I2Q13409 638 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 FSCBQ5H9T9 825 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GRTP1Q5TC63 336 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 NCBP2-AS2Q69YL0 99 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 SCUBE3Q8IX30 993 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 BTBD9Q96Q07 612 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 CENPKQ9BS16 269 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 KLHL4Q9C0H6 718 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 DHX35Q9H5Z1 703 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 ERAP1Q9NZ08 941 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 CDH22Q9UJ99 828 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 ARHGAP42A6NI28 874 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 PIK3R2O00459 728 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 AP1G1O43747 822 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GABBR2O75899 941 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 RALBP11234 206 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 UQCRBP14927 111 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GP5P40197 560 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 NUMBP49757 651 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 ABCE1P61221 599 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 SLC25A3Q00325 362 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 MAVSQ7Z434 540 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 SLC16A10Q8TF71 515 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 TRAPPC12Q8WVT3 735 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 CPNE1Q99829 537 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 TRIM56Q9BRZ2 755 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 TRIM4Q9C037 500 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 PLEKHA5Q9HAU0 1116 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 DMAP1Q9NPF5 467 aaPredicted RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 CPSF2Q9P2I0 782 aaKnown RBP15.4■□□□□ 0.06
SNF8-203ENST00000504000 PCDHB12Q9Y5F1 795 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 CDY2AQ9Y6F7 541 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 CDY1Q9Y6F8 540 aa15.4■□□□□ 0.06
SNF8-203ENST00000504000 GOLGB1Q14789 3259 aaKnown RBP15.39■□□□□ 0.05
SNF8-203ENST00000504000 FZD9O00144 591 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 NFKBIEO00221 500 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 H2AFYO75367 372 aaKnown RBP15.39■□□□□ 0.05
SNF8-203ENST00000504000 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 POLBP06746 335 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
SNF8-203ENST00000504000 ACADSBP45954 432 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 RAB27AP51159 221 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 HK2P52789 917 aa15.39■□□□□ 0.05
SNF8-203ENST00000504000 MED21Q13503 144 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms