RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 COX16Q9P0S2 106 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 STARD13Q9Y3M8 1113 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 MUC6Q6W4X9 2439 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TCRBV5S1A1TA0A578 114 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 C2CD4BA6NLJ0 364 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 SERPING1P05155 500 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 KRT3P12035 628 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 GZMAP12544 262 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 ABCB4P21439 1286 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 CASP14P31944 242 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 KIR2DL1P43626 348 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 CXCR3P49682 368 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 SGSHP51688 502 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 SEC13P55735 322 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 NHLH1Q02575 133 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 CSTF1Q05048 431 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 MS4A13Q5J8X5 152 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 BRMS1LQ5PSV4 323 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 EMC1Q8N766 993 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 NELL1Q92832 810 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 RNF34Q969K3 372 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 ACDQ96AP0 544 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 PRICKLE1Q96MT3 831 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 RBSNQ9H1K0 784 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 PIGVQ9NUD9 493 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 CLEC4EQ9ULY5 219 aa18.9■□□□□ 0.62
PDLIM7-209ENST00000503346 ANTXRLA6NF34 631 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 K7ESF4 209 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 AP5Z1O43299 807 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 ENDOD1O94919 500 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 HNRNPH3P31942 346 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 DEUP1Q05D60 604 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 HSF5Q4G112 596 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 C10orf76Q5T2E6 689 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 SND1Q7KZF4 910 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 SYT13Q7L8C5 426 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 HJURPQ8NCD3 748 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 JOSD2Q8TAC2 188 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 RXFP2Q8WXD0 754 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 ATOH1Q92858 354 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 MYEOVQ96EZ4 313 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 CFAP57Q96MR6 1250 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 PRMT1Q99873 361 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 SELENOOQ9BVL4 669 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 ARHGEF38Q9NXL2 777 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 PAXBP1Q9Y5B6 917 aa18.89■□□□□ 0.61
PDLIM7-209ENST00000503346 TMCO5BA8MYB1 307 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 PRRT4C9JH25 899 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 TBL1XO60907 577 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 GJB6O95452 261 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 PDGFRAP16234 1089 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 TACR2P21452 398 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 RRM1P23921 792 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 HOXA6P31267 233 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 RDXP35241 583 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 CCDC14Q49A88 953 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 C2orf27AQ580R0 203 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 TDRD12Q587J7 1177 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 PPP1R15BQ5SWA1 713 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 RAP1GAP2Q684P5 730 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 TSSK4Q6SA08 328 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 CHSY1Q86X52 802 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 ZNF557Q8N988 423 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 FAM126AQ9BYI3 521 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 WDCPQ9H6R7 721 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 HCN2Q9UL51 889 aa18.88■□□□□ 0.61
PDLIM7-209ENST00000503346 TYW5A2RUC4 315 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 RTN2O75298 545 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 FTLP02792 175 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 SDC4P31431 198 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 RFC1P35251 1148 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 TIE1P35590 1138 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 PTPN9P43378 593 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 ATXN1P54253 815 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 RPS24P62847 133 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 GEN1Q17RS7 908 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 VPS36Q86VN1 386 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 LGI2Q8N0V4 545 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 IL17RCQ8NAC3 791 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 TKTL2Q9H0I9 626 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 MYOFQ9NZM1 2061 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 MMP17Q9ULZ9 603 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 SLC8A2Q9UPR5 921 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 HS3ST4Q9Y661 456 aa18.87■□□□□ 0.61
PDLIM7-209ENST00000503346 CACNA1HO95180 2353 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 F5H5T6 163 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 I6L893 689 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 PAGE1O75459 146 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 ADCY5O95622 1261 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 TPM1P09493 284 aa18.86■□□□□ 0.61
PDLIM7-209ENST00000503346 GPD1P21695 349 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms