RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 FBXO36Q8NEA4 188 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 NT5C3BQ969T7 300 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 SLC2A13Q96QE2 648 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 SMOQ99835 787 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 ARNT2Q9HBZ2 717 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 KCNK9Q9NPC2 374 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 GGA2Q9UJY4 613 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 STAP1Q9ULZ2 295 aa11.96□□□□□ -0.49
USP46-204ENST00000503060 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 A0A0U1RQF3 1178 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 FBXO21O94952 628 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 TSHRP16473 764 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 IFNAR2P48551 515 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 NR2C2P49116 596 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 SLC10A2Q12908 348 aaPredicted RBP11.96□□□□□ -0.5
USP46-204ENST00000503060 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.5
USP46-204ENST00000503060 EFHC2Q5JST6 749 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 HHATQ5VTY9 493 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 PPP1R21Q6ZMI0 780 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 PSTKQ8IV42 348 aaKnown RBP11.96□□□□□ -0.5
USP46-204ENST00000503060 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.5
USP46-204ENST00000503060 MGARPQ8TDB4 240 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 ULBP1Q9BZM6 244 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 RASSF4Q9H2L5 321 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.5
USP46-204ENST00000503060 SLC24A2Q9UI40 661 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 PTCH2Q9Y6C5 1203 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 USP3Q9Y6I4 520 aa11.96□□□□□ -0.5
USP46-204ENST00000503060 RASA4BC9J798 803 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ANKRD65E5RJM6 399 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 NRP1O14786 923 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 RASA4O43374 803 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 POMCP01189 267 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 GOT1P17174 413 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 AMPD1P23109 780 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 PCSK1P29120 753 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SSTR1P30872 391 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ARL4AP40617 200 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 RABGGTBP53611 331 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 CORO7P57737 925 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 BPIFB3P59826 476 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 MPP2Q14168 576 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 RASA2Q15283 850 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SLC45A4Q5BKX6 768 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 FAM26DQ5JW98 314 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 KIAA1614Q5VZ46 1190 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 HFE2Q6ZVN8 426 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 PYROXD2Q8N2H3 581 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ANKRD42Q8N9B4 389 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ZMIZ2Q8NF64 920 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 RSRC1Q96IZ7 334 aaKnown RBP11.95□□□□□ -0.5
USP46-204ENST00000503060 NELL2Q99435 816 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ADAM2Q99965 735 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 TRMT13Q9NUP7 481 aaKnown RBP11.95□□□□□ -0.5
USP46-204ENST00000503060 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
USP46-204ENST00000503060 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ATXN2Q99700 1313 aaKnown RBP11.95□□□□□ -0.5
USP46-204ENST00000503060 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 I3L4J1 428 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 M0QYT0 321 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 MYO1CO00159 1063 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ODC1P11926 461 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 DAOAP59103 153 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SP3Q02447 781 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ITGA7Q13683 1181 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 LRRC14Q15048 493 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SLC5A9Q2M3M2 681 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 FAM182AQ5T1J6 154 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SYPL2Q5VXT5 272 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 NCBP2-AS2Q69YL0 99 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 C3orf62Q6ZUJ4 267 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 PALM2Q8IXS6 379 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 LRRN4Q8WUT4 740 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 DYDC1Q8WWB3 177 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 PGBD4Q96DM1 585 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SEC16BQ96JE7 1060 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 QKIQ96PU8 341 aaKnown RBP eCLIP11.95□□□□□ -0.5
USP46-204ENST00000503060 RTP3Q9BQQ7 232 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 ETNK2Q9NVF9 386 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 FETUBQ9UGM5 382 aa11.95□□□□□ -0.5
USP46-204ENST00000503060 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 AOC2O75106 756 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 TOMM70O94826 608 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 FYNP06241 537 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 MAGEA6P43360 314 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CACNA2D1P54289 1103 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 DEUP1Q05D60 604 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 SFSWAPQ12872 951 aaKnown RBP11.94□□□□□ -0.5
USP46-204ENST00000503060 GRIK3Q13003 919 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CBLBQ13191 982 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 MTM1Q13496 603 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 GKAP1Q5VSY0 366 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms