RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 BDH2Q9BUT1 245 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC25A23Q9BV35 468 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SP110Q9HB58 689 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 CLUHO75153 1309 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 RBP1P09455 135 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP2F1P24903 491 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 MIPP30301 263 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 GALK1P51570 392 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 USP46P62068 366 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 FASTKQ14296 549 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 KDELC2Q7Z4H8 507 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 POLNQ7Z5Q5 900 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 GIMAP4Q9NUV9 329 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 RAB26Q9ULW5 256 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 KLHL33A6NCF5 533 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 PEX1O43933 1283 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ANXA9O76027 345 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 LPIN1Q14693 890 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 DCAF6Q58WW2 860 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ZNF280CQ8ND82 737 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 IPMKQ8NFU5 416 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 NMRAL1Q9HBL8 299 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ITGB3P05106 788 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 RARBP10826 455 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 WDR4P57081 412 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 RUNX1T1Q06455 604 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 PTP4A2Q12974 167 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 MMRN1Q13201 1228 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ITGADQ13349 1161 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 NFYCQ13952 458 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ANO4Q32M45 955 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 TRAF7Q6Q0C0 670 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 GANCQ8TET4 914 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 C17orf80Q9BSJ5 609 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ADARB2Q9NS39 739 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ETNK2Q9NVF9 386 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 AP4E1Q9UPM8 1137 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ANKRD6Q9Y2G4 727 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 SPDYE2BA6NHP3 402 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 PSMD10O75832 226 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 ADRB2P07550 413 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 SPDYE6P0CI01 402 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 GABRB2P47870 512 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 NR2C2P49116 596 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 DMC1Q14565 340 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP2R1Q6VVX0 501 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 CHSY1Q86X52 802 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 FNIP1Q8TF40 1166 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 DCUN1D1Q96GG9 259 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 PRMT6Q96LA8 375 aaPredicted RBP17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 MBOAT7Q96N66 472 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 COG4Q9H9E3 785 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 NR5A2O00482 541 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 PIAS1O75925 651 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 THEM5Q8N1Q8 247 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC44A1Q8WWI5 657 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 BORCS5Q969J3 196 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 SARS2Q9NP81 518 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
HMGXB3-201ENST00000502717 TPP1O14773 563 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 LDLRP01130 860 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 BPGMP07738 259 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC18A1P54219 525 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 MTTPP55157 894 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 NIPA1Q7RTP0 329 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CLPTM1LQ96KA5 538 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 PLLPQ9Y342 182 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 HBS1LQ9Y450 684 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 WASF2Q9Y6W5 498 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CAPN8A6NHC0 703 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 MEIS2O14770 477 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TBX10O75333 385 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TRIM74Q86UV6 250 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TRIM73Q86UV7 250 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 PALB2Q86YC2 1186 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 C12orf56Q8IXR9 622 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 EGFL8Q99944 293 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 NDEL1Q9GZM8 345 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 DHX33Q9H6R0 707 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CLK4Q9HAZ1 481 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP3A43Q9HB55 503 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TRPC7Q9HCX4 862 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 MYOZ2Q9NPC6 264 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 PRMT7Q9NVM4 692 aaPredicted RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TRIM38O00635 465 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 GSNP06396 782 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 RBL1P28749 1068 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 MRPL28Q13084 256 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 SNX17Q15036 470 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 FUT11Q495W5 492 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP4X1Q8N118 509 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 TMEM176AQ96HP8 235 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 CHST12Q9NRB3 414 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 MYO1GB0I1T2 1018 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 ZMPSTE24O75844 475 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms