RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PAGE5Q96GU1 130 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 ILKAPQ9H0C8 392 aaPredicted RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 KCNIP3Q9Y2W7 256 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 FUOMA2VDF0 154 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TMEM221A6NGB7 291 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CLCA1A8K7I4 914 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TPST1O60507 370 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 SERPINB5P36952 375 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 RNF4P78317 190 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 PQLC1Q8N2U9 271 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TC2NQ8N9U0 490 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 GALNT11Q8NCW6 608 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 RMND5AQ9H871 391 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 A0A075B6Q4 140 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 SPARCP09486 303 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 RARGP13631 454 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 IL1R1P14778 569 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CD9P21926 228 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 ME2P23368 584 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 XKR5Q6UX68 686 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 MARVELD2Q8N4S9 558 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CAMKK1Q8N5S9 505 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 ZSWIM3Q96MP5 696 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 FICDQ9BVA6 458 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 SLA2Q9H6Q3 261 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TYK2P29597 1187 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 GTF2IP78347 998 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 BTN1A1Q13410 526 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 DNASE1L3Q13609 305 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 C6orf52Q5T4I8 152 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 UBE2UQ5VVX9 321 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CYP20A1Q6UW02 462 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF223Q9UK11 482 aaPredicted RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CABIN1Q9Y6J0 2220 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 LSM3P62310 102 aaKnown RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 PWP1Q13610 501 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TMEM132EQ6IEE7 984 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 C4orf50Q6ZRC1 276 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 KBTBD6Q86V97 674 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CKAP2Q8WWK9 683 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.635e-49■■■■■ 41.8
NEAT1-202ENST00000501122 FARSAQ9Y285 508 aaKnown RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 C2orf71A6NGG8 1288 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 GNA12Q03113 381 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 TWF1Q12792 350 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CALCRLQ16602 461 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 PHKG1Q16816 387 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 LINS1Q8NG48 757 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 C3orf49Q96BT1 292 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 PPP1R36Q96LQ0 422 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 C12orf66Q96MD2 445 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 MORF4L1Q9UBU8 362 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 DMGDHQ9UI17 866 aaKnown RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 SLC9A8Q9Y2E8 581 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 PEX16Q9Y5Y5 336 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 KNTC1P50748 2209 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 A8MUI8 341 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 MB21D2Q8IYB1 491 aaPredicted RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 CCDC74AQ96AQ1 378 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 COG8Q96MW5 612 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 AGPAT3Q9NRZ7 376 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 NEDD4P46934 1319 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 LDLRP01130 860 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 MAPKAPK2P49137 400 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 IL5RAQ01344 420 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 DGKDQ16760 1214 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 MROH9Q5TGP6 573 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF613Q6PF04 617 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 DNAJB7Q7Z6W7 309 aaPredicted RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
NEAT1-202ENST00000501122 SRFBP1Q8NEF9 429 aaKnown RBP4.89□□□□□ -1.63
NEAT1-202ENST00000501122 FANCGO15287 622 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 DFNA5O60443 496 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RB1P06400 928 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PPARAQ07869 468 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 GRB14Q14449 540 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 VMACQ2NL98 169 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 LDLRAP1Q5SW96 308 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NSUN6Q8TEA1 469 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TMCO6Q96DC7 493 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 S100A14Q9HCY8 104 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 GTSE1Q9NYZ3 720 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MDM4O15151 490 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MMP8P22894 467 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RAB2BQ8WUD1 216 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF75CPQ92670 426 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NAALADL1Q9UQQ1 740 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CYP3A7-CYP3A51PA0A087WV96 503 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PVALEFA0A1B0GWK0 134 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CYP3A7P24462 503 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 HSD17B7P56937 341 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 HERVK_113P63132 956 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ABCC8Q09428 1581 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 GIT2Q14161 759 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 LRIF1Q5T3J3 769 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MZT2AQ6P582 158 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 KCTD6Q8NC69 237 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TMED9Q9BVK6 235 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms