RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 BRCC3P46736 316 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 RNASE9P60153 205 aaKnown RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 ORC1Q13415 861 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 ZNF268Q14587 947 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 LRCH2Q5VUJ6 765 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 DNAJB7Q7Z6W7 309 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 CHDHQ8NE62 594 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 BEST2Q8NFU1 509 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 ETNPPLQ8TBG4 499 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 SLC5A5Q92911 643 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 LENG9Q96B70 501 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 PNKPQ96T60 521 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 ACOX2Q99424 681 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 RIT2Q99578 217 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 SDF4Q9BRK5 362 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 TEKT3Q9BXF9 490 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 RAB34Q9BZG1 259 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 CXCL16Q9H2A7 254 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 LINC00597Q9H2U6 94 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 C6orf106Q9H6K1 298 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 AGO4Q9HCK5 861 aaKnown RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 KCNMB3Q9NPA1 279 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 KCNH7Q9NS40 1196 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 TBC1D22BQ9NU19 505 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 SEPT10Q9P0V9 454 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 MAFFQ9ULX9 164 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 NEU2Q9Y3R4 380 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 SRPRBQ9Y5M8 271 aaKnown RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 RAD54BQ9Y620 910 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 U3KQA8 63 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 RP1P56715 2156 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CKAP5Q14008 2032 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CCDC187A0A096LP49 1063 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 VWA3AA6NCI4 1184 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 DDX39AO00148 427 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 CASC3O15234 703 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 DHX15O43143 795 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 PSMD10O75832 226 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CBX6O95503 412 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 FGF19O95750 216 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 GP1BAP07359 652 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 RARAP10276 462 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CKMT1AP12532 417 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 COX6B1P14854 86 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CD33P20138 364 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 PTMSP20962 102 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 NTSR1P30989 418 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 LONP1P36776 959 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 EIF2DP41214 584 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 TNFRSF4P43489 277 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 TPMTP51580 245 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 EPHB3P54753 998 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 PLD1Q13393 1074 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 MRPL58Q14197 206 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 PDIA5Q14554 519 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 INPP5JQ15735 1006 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 MIIPQ5JXC2 388 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 NCAPH2Q6IBW4 605 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 TCTN3Q6NUS6 607 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 SWSAP1Q6NVH7 229 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 ASB18Q6ZVZ8 466 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 TRMT11Q7Z4G4 463 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 ZFAND4Q86XD8 727 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 JAMLQ86YT9 394 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 KSR1Q8IVT5 923 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CKAP2LQ8IYA6 745 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 MAB21L3Q8N8X9 362 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 Q8NA96 180 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 ERMNQ8TAM6 284 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 HAS1Q92839 578 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 HVCN1Q96D96 273 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 CATSPER2Q96P56 530 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 GABRG3Q99928 467 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 OXCT2Q9BYC2 517 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 SLC29A3Q9BZD2 475 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 OSBPL2Q9H1P3 480 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 PCED1AQ9H1Q7 454 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 TTC12Q9H892 705 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 ITM2CQ9NQX7 267 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 ARHGEF4Q9NR80 690 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 RRN3Q9NYV6 651 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 LRWD1Q9UFC0 647 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 DMGDHQ9UI17 866 aaKnown RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 GDF2Q9UK05 429 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 FBXO2Q9UK22 296 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 PCDHA7Q9UN72 937 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 PCDHA12Q9UN75 941 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 DNMT3AQ9Y6K1 912 aaPredicted RBP5.52□□□□□ -1.53
FXN-205ENST00000498653 ANAPC1Q9H1A4 1944 aa5.52□□□□□ -1.53
FXN-205ENST00000498653 HIVEP2P31629 2446 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 A0A1W2PQ27 194 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 A0A1W2PQ64 194 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 CHMP2AO43633 222 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 ICMTO60725 284 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 SOAT2O75908 522 aa5.51□□□□□ -1.53
FXN-205ENST00000498653 NFATC1O95644 943 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms