RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MARCKSL1P49006 195 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 AIF1P55008 147 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ZP2Q05996 745 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 SCAPQ12770 1279 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 KRT81Q14533 505 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ODF2Q5BJF6 829 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 PPP6R3Q5H9R7 873 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-227ENST00000498056 MS4A13Q5J8X5 152 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 PIK3R6Q5UE93 754 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 TRIM68Q6AZZ1 485 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 TXNRD3NBQ6F5E7 133 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 CYP4V2Q6ZWL3 525 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ADHFE1Q8IWW8 467 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 RHOT1Q8IXI2 618 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ZDHHC14Q8IZN3 488 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 LRRC3BQ96PB8 259 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 PLA2G2FQ9BZM2 168 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 SIK2Q9H0K1 926 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 THG1LQ9NWX6 298 aaKnown RBP14.05□□□□□ -0.16
CPNE1-227ENST00000498056 DUS2Q9NX74 493 aaKnown RBP14.05□□□□□ -0.16
CPNE1-227ENST00000498056 TBC1D14Q9P2M4 693 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 LIMD1Q9UGP4 676 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 HS3ST4Q9Y661 456 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 LRRD1A4D1F6 860 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 ANHXE9PGG2 379 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 TRDMT1O14717 391 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 SLC9A3R1O14745 358 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 CREB3O43889 395 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 TSPAN3O60637 253 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 ASGR2P07307 311 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 PSMC3P17980 439 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 TACR2P21452 398 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 GDI1P31150 447 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 SLC6A4P31645 630 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 MTA1Q13330 715 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 CA9Q16790 459 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 NADSYN1Q6IA69 706 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 HTR3DQ70Z44 454 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 NT5DC3Q86UY8 548 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 MFSD6LQ8IWD5 586 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 ATXN2LQ8WWM7 1075 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 KRT35Q92764 455 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 BHMTQ93088 406 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 PRICKLE1Q96MT3 831 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 RPP25Q9BUL9 199 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 AMFRQ9UKV5 643 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
CPNE1-227ENST00000498056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPNE1-227ENST00000498056 TYW5A2RUC4 315 aaKnown RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 LOC730098B7Z3J9 87 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 E9PAM4 449 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 NFATC1O95644 943 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 RARAP10276 462 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 ARSAP15289 507 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 CDH6P55285 790 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 TPI1P60174 286 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 FCHO2Q0JRZ9 810 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 RABGAP1LQ5R372 815 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 TPGS1Q6ZTW0 290 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 CIR1Q86X95 450 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 CCDC50Q8IVM0 306 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 ATP2A3Q93084 1043 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 OTUB2Q96DC9 234 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 RPRD1AQ96P16 312 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 ASB2Q96Q27 587 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 HAPLN3Q96S86 360 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 EPAS1Q99814 870 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 TRMT61BQ9BVS5 477 aaKnown RBP14.03□□□□□ -0.16
CPNE1-227ENST00000498056 EBF3Q9H4W6 596 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 BRD9Q9H8M2 597 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 KCNK12Q9HB15 430 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 IGSF9Q9P2J2 1179 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 PRKAG3Q9UGI9 489 aa14.03□□□□□ -0.16
CPNE1-227ENST00000498056 UNC80Q8N2C7 3258 aa14.02□□□□□ -0.16
CPNE1-227ENST00000498056 CCDC66A2RUB6 948 aa14.02□□□□□ -0.17
CPNE1-227ENST00000498056 MIF4GDA9UHW6 222 aaKnown RBP14.02□□□□□ -0.17
CPNE1-227ENST00000498056 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
CPNE1-227ENST00000498056 PI4K2BG5E9Z4 385 aa14.02□□□□□ -0.17
CPNE1-227ENST00000498056 SRGAP2O75044 1071 aa14.02□□□□□ -0.17
CPNE1-227ENST00000498056 ADH1CP00326 375 aa14.02□□□□□ -0.17
CPNE1-227ENST00000498056 CYBBP04839 570 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms