RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ACAD8Q9UKU7 415 aa2.72□□□□□ -1.97
CKS1BP2-201ENST00000497342 FZD1Q9UP38 647 aa2.72□□□□□ -1.97
CKS1BP2-201ENST00000497342 CTNND2Q9UQB3 1225 aa2.72□□□□□ -1.97
CKS1BP2-201ENST00000497342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.72□□□□□ -1.97
CKS1BP2-201ENST00000497342 RGPD2P0DJD1 1756 aa2.72□□□□□ -1.97
CKS1BP2-201ENST00000497342 FLNCQ14315 2725 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 FN1P02751 2386 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 NCAPD2Q15021 1401 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CCL15-CCL14A0A0B4J2E2 113 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 A0A1B0GTL3 188 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 A0A1W2PQM1 296 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CCDC78A2IDD5 438 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 VWA3AA6NCI4 1184 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 SYNDIG1LA6NDD5 238 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 GAGE10A6NGK3 116 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CXorf49A8MYA2 514 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TMEM233B4DJY2 109 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 B5MCH6 92 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 E9PLN8 166 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 H7C0S8 307 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 RRP9O43818 475 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 UNC5CO95185 931 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 LMNAP02545 664 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 GNAI2P04899 355 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 SNRPA1P09661 255 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CYP2C8P10632 490 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ACADMP11310 421 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ALAS1P13196 640 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PECAM1P16284 738 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZNF28P17035 718 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ITGB5P18084 799 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CDH2P19022 906 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TBXAS1P24557 533 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 EPHA8P29322 1005 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 POLD2P49005 469 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TOB1P50616 345 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PTTG1IPP53801 180 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PER3P56645 1201 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 DLG4P78352 724 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ADAM17P78536 824 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TIAL1Q01085 375 aaKnown RBP eCLIP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PTH1RQ03431 593 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 DUSP2Q05923 314 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 FHL3Q13643 280 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 BECN1Q14457 450 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CLCA4Q14CN2 919 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CCL15Q16663 113 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TSTQ16762 297 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TIGD6Q17RP2 521 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TBRG1Q3YBR2 411 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CRY2Q49AN0 593 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 MFSD14BQ5SR56 506 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATPAF1Q5TC12 328 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAXCQ5TGI0 409 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ANKRD45Q5TZF3 282 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ARMC3Q5W041 872 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 AFMIDQ63HM1 303 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATG16L1Q676U5 607 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 OLFML2BQ68BL8 750 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 KRT40Q6A162 431 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 DRICH1Q6PGQ1 229 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZDHHC24Q6UX98 284 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CCDC129Q6ZRS4 1044 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 H1FNTQ75WM6 255 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 LRRC8DQ7L1W4 858 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ENOSF1Q7L5Y1 443 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 USP37Q86T82 979 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CCDC117Q8IWD4 279 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 DNAJC10Q8IXB1 793 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 STPG3Q8N7X2 389 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 LSM14AQ8ND56 463 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 MBD3L2Q8NHZ7 208 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 NFKBIDQ8NI38 313 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 WDR48Q8TAF3 677 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZCCHC10Q8TBK6 192 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZCCHC14Q8WYQ9 949 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 RUBCNQ92622 972 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ALG3Q92685 438 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TNPO1Q92973 898 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 RAB24Q969Q5 203 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 LRRC46Q96FV0 321 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 INTS4Q96HW7 963 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 COG8Q96MW5 612 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TIGD1Q96MW7 591 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZMAT2Q96NC0 199 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 CLIC6Q96NY7 704 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 BBC3Q96PG8 261 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 NR1H4Q96RI1 486 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 BAG1Q99933 345 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 VKORC1Q9BQB6 163 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 TACO1Q9BSH4 297 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 C11orf84Q9BUA3 381 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PHF7Q9BWX1 381 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 SLC46A2Q9BY10 475 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 PACSIN1Q9BY11 444 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 EDEM3Q9BZQ6 932 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZCWPW1Q9H0M4 648 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ERVK-5Q9HDB9 667 aa2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZCCHC17Q9NP64 241 aaKnown RBP2.71□□□□□ -1.98
CKS1BP2-201ENST00000497342 ARGLU1Q9NWB6 273 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms