RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 DONSONQ9NYP3 566 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 CWC15Q9P013 229 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 CHD7Q9P2D1 2997 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 PCYOX1Q9UHG3 505 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 DRG1Q9Y295 367 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 NR2E1Q9Y466 385 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 HCFC2Q9Y5Z7 792 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 CHD9Q3L8U1 2897 aa7.56□□□□□ -1.2
GPATCH4-208ENST00000497287 MYO9BQ13459 2157 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 TRAV19A0A0A6YYK7 116 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 CCDC195A0A1B0GUA6 201 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 C2orf78A6NCI8 922 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 EPOPA6NHQ4 379 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ZNF197O14709 1029 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 MCF2LO15068 1137 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 FGF10O15520 208 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 RAD51CO43502 376 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 LIASO43766 372 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 RFPL2O75678 378 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ZNF189O75820 626 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 LRIG2O94898 1065 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 IGLV3-27P01718 113 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SRGAP2BP0DMP2 458 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 HDCP19113 662 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 AMPD1P23109 780 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SERPINB6P35237 376 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SLC11A2P49281 568 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 EPHA5P54756 1037 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 MLLT6P55198 1093 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 DR1Q01658 176 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 OTUD4Q01804 1114 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ADCY2Q08462 1091 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SEMA3BQ13214 749 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SNX1Q13596 522 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 BYSLQ13895 437 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 DPYSQ14117 519 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ELF2Q15723 593 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 RFX8Q6ZV50 586 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SYDE1Q6ZW31 735 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 GAREM2Q75VX8 874 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ADGRD2Q7Z7M1 963 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 TMEM150AQ86TG1 271 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 PQLC3Q8N755 202 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 PLD5Q8N7P1 536 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ACTL9Q8TC94 416 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 P3H4Q92791 437 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 AZIN2Q96A70 460 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 HAUS1Q96CS2 278 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 TBC1D31Q96DN5 1066 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 CCDC114Q96M63 670 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 DDX50Q9BQ39 737 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 MAGEB5Q9BZ81 275 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 RAB17Q9H0T7 212 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 NSUN3Q9H649 340 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SFXN1Q9H9B4 322 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ANLNQ9NQW6 1124 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ARHGEF4Q9NR80 690 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 LMCD1Q9NZU5 365 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 AMACRQ9UHK6 382 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ZNF148Q9UQR1 794 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 R3HDM2Q9Y2K5 976 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 SNX10Q9Y5X0 201 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 RAD54BQ9Y620 910 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 HS3ST4Q9Y661 456 aa7.55□□□□□ -1.2
GPATCH4-208ENST00000497287 ANAPC1Q9H1A4 1944 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 CFAP69A5D8W1 941 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 HACD1B0YJ81 288 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 E9PAM4 449 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 FAM72CH0Y354 149 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 H7C0C1 242 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 I6L893 689 aaPredicted RBP7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 RFXAPO00287 272 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 DCLK1O15075 740 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 TTI1O43156 1089 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 ACSL4O60488 711 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 HEXIM1O94992 359 aaKnown RBP7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 ECEL1O95672 775 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 LATS1O95835 1130 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 OLFM2O95897 454 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 GAS8O95995 478 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 CKMP06732 381 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 ITGAVP06756 1048 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 RHOP08100 348 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 ERCC2P18074 760 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 EPHB2P29323 1055 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 HOXC13P31276 330 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 PTGIRP43119 386 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 ATP5OP48047 213 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 KCNJ1P48048 391 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 KCNQ1P51787 676 aa7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 EIF3EP60228 445 aaKnown RBP7.54□□□□□ -1.2
GPATCH4-208ENST00000497287 SLC7A9P82251 487 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms