RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KCNB1Q14721 858 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 SMAD1Q15797 465 aaKnown RBP5.42□□□□□ -1.54
VPS36-206ENST00000497149 CNGA3Q16281 694 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 STRIP1Q5VSL9 837 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3GQ6DHY5 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 DGAT2L7PQ6IED9 249 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3CQ6IPX1 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 WDR93Q6P2C0 686 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 VSTM1Q6UX27 236 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 CYP26C1Q6V0L0 522 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3Q8IZP1 549 aaPredicted RBP5.42□□□□□ -1.54
VPS36-206ENST00000497149 HIC2Q96JB3 615 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 MRIQ9BWK5 157 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 RNF26Q9BY78 433 aaPredicted RBP5.42□□□□□ -1.54
VPS36-206ENST00000497149 RIOX1Q9H6W3 641 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 G6PC2Q9NQR9 355 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 LZTS1Q9Y250 596 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 AOX1Q06278 1338 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 FAM90A20PA6NIJ5 464 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 MBD3L5A6NJ08 208 aaPredicted RBP5.41□□□□□ -1.54
VPS36-206ENST00000497149 LRRC3CA6NJW4 275 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 UBE2Q2LH0YL09 131 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 SMIM22K7EJ46 135 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 NPHP1O15259 732 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 PROP1O75360 226 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 TK1P04183 234 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 NHLRC4P0CG21 123 aaPredicted RBP5.41□□□□□ -1.54
VPS36-206ENST00000497149 CYP2D6P10635 497 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 GRK5P34947 590 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 HOXD12P35452 270 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
VPS36-206ENST00000497149 ACTR2P61160 394 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 EFR3AQ14156 821 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 DCTN1Q14203 1278 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 SUMO4Q6EEV6 95 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 SYT13Q7L8C5 426 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 CHSY1Q86X52 802 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 C2CD5Q86YS7 1000 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 LAS2Q8IYD9 372 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 BOLLQ8N9W6 283 aaKnown RBP5.41□□□□□ -1.54
VPS36-206ENST00000497149 GOLGA1Q92805 767 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 RITA1Q96K30 269 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 UBXN10Q96LJ8 280 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 SAGE1Q9NXZ1 904 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 BAG5Q9UL15 447 aa5.41□□□□□ -1.54
VPS36-206ENST00000497149 C16orf96A6NNT2 1141 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 EIF3FO00303 357 aaPredicted RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 PRYO14603 147 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 HEXIM1O94992 359 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 KAT7O95251 611 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 NUDT3O95989 172 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 TFRCP02786 760 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 SLC3A2P08195 630 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 CHRM5P08912 532 aaPredicted RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 BMP5P22003 454 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 SLC8A1P32418 973 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 STAT6P42226 847 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 RBM5P52756 815 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS36-206ENST00000497149 TAS2R50P59544 299 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 RNASELQ05823 741 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 SLC14A1Q13336 389 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 PROSER3Q2NL68 480 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 FBXO42Q6P3S6 717 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 RANBP10Q6VN20 620 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 RASGRP2Q7LDG7 609 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 ANKS1BQ7Z6G8 1248 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 SRFBP1Q8NEF9 429 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 PYM1Q9BRP8 204 aaKnown RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 CHODLQ9H9P2 273 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 TMLHEQ9NVH6 421 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 B3GNT3Q9Y2A9 372 aa5.4□□□□□ -1.54
VPS36-206ENST00000497149 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
VPS36-206ENST00000497149 CYP3A7-CYP3A51PA0A087WV96 503 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 AGAP5A6NIR3 686 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 C3orf70A6NLC5 250 aaPredicted RBP5.39□□□□□ -1.55
VPS36-206ENST00000497149 CKMT1AP12532 417 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 IGFBP2P18065 325 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 RXRAP19793 462 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 CYP3A7P24462 503 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 NDUFS1P28331 727 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 MAPK9P45984 424 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 MCM2P49736 904 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 VPS41P49754 854 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 PAPOLAP51003 745 aaKnown RBP5.39□□□□□ -1.55
VPS36-206ENST00000497149 RCAN1P53805 252 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 TFF2Q03403 129 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 PDCLQ13371 301 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 SLC39A5Q6ZMH5 540 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 TMEM57Q8N5G2 664 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 PNLDC1Q8NA58 520 aaKnown RBP5.39□□□□□ -1.55
VPS36-206ENST00000497149 SLC2A12Q8TD20 617 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 CLEC4CQ8WTT0 213 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 ASB12Q8WXK4 309 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 ZNF845Q96IR2 970 aaPredicted RBP5.39□□□□□ -1.55
VPS36-206ENST00000497149 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
VPS36-206ENST00000497149 ASNSD1Q9NWL6 643 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms