RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 THPOP40225 353 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 RABGGTBP53611 331 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 TIGD5Q53EQ6 642 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 FYB2Q5VWT5 728 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 SH2D5Q6ZV89 423 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 OTOAQ7RTW8 1153 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-220ENST00000496711 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 ECT2Q9H8V3 914 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
GARNL3-220ENST00000496711 SMYD2Q9NRG4 433 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 RRN3Q9NYV6 651 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 WDR91A4D1P6 747 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 COPEO14579 308 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF623O75123 536 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CSH1P0DML2 217 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CSH2P0DML3 217 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 NCAM1P13591 858 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CD52P31358 61 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 GRIA1P42261 906 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ETV4P43268 484 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 TPI1P60174 286 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 SEMA3BQ13214 749 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF276Q8N554 614 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ADAM32Q8TC27 787 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 C10orf82Q8WW14 230 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 MTBPQ96DY7 904 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 STAMBPL1Q96FJ0 436 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ARHGAP39Q9C0H5 1083 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 IQCGQ9H095 443 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 C12orf65Q9H3J6 166 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CSNK1G1Q9HCP0 422 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 PADI3Q9ULW8 664 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 GABRQQ9UN88 632 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 F5H423 210 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CA12O43570 354 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 MGEA5O60502 916 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 DCTN3O75935 186 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 KRT38O76015 456 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ASGR1P07306 291 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CCNFP41002 786 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 SERPINB9P50453 376 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 GRIK3Q13003 919 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 SETDB1Q15047 1291 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 STEAP4Q687X5 459 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 BHLHA9Q7RTU4 235 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 METTL23Q86XA0 190 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 SUGP1Q8IWZ8 645 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 NETO2Q8NC67 525 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 CCNYQ8ND76 341 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 IRGQQ8WZA9 623 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 FAM111AQ96PZ2 611 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 RTP3Q9BQQ7 232 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM56Q9BRZ2 755 aaKnown RBP13.44□□□□□ -0.26
GARNL3-220ENST00000496711 PRDM12Q9H4Q4 367 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 MANSC1Q9H8J5 431 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 DDIT4Q9NX09 232 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 MKS1Q9NXB0 559 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 SEPT10Q9P0V9 454 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 FBXW11Q9UKB1 542 aa13.44□□□□□ -0.26
GARNL3-220ENST00000496711 FAM72CH0Y354 149 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 I3L4J1 428 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 F9P00740 461 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 CYP11A1P05108 521 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 TROVE2P10155 538 aaKnown RBP eCLIP13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ERCC2P18074 760 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 PSMB4P28070 264 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ALDH3A1P30838 453 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 SKIV2L2P42285 1042 aaKnown RBP13.43□□□□□ -0.26
GARNL3-220ENST00000496711 HCAR3P49019 387 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 FLT3LGP49771 235 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 WASHC5Q12768 1159 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 DSC3Q14574 896 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 PARP6Q2NL67 630 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
GARNL3-220ENST00000496711 FAM72AQ5TYM5 149 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 FAM72DQ6L9T8 149 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 FAM72BQ86X60 149 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF398Q8TD17 642 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 DEPDC1BQ8WUY9 529 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 SRPK1Q96SB4 655 aaKnown RBP13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 CEP41Q9BYV8 373 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 RHOBTB2Q9BYZ6 727 aa13.43□□□□□ -0.26
GARNL3-220ENST00000496711 ANLNQ9NQW6 1124 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms