RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CPNE8Q86YQ8 564 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 RHOT1Q8IXI2 618 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 FAM217AQ8IXS0 508 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 CPXM2Q8N436 756 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 RSAD2Q8WXG1 361 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 SIK2Q9H0K1 926 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 XPO7Q9UIA9 1087 aaKnown RBP22.53■■□□□ 1.2
C9orf3-222ENST00000496567 AP4E1Q9UPM8 1137 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 HYOU1Q9Y4L1 999 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 HS3ST4Q9Y661 456 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 WNT6Q9Y6F9 365 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 USP27XA6NNY8 438 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 I6L893 689 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-222ENST00000496567 TCF4P15884 667 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 IL1R2P27930 398 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 TAS2R40P59535 323 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 PEX26Q7Z412 305 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 CHSY1Q86X52 802 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 ATP2A3Q93084 1043 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 FAM83CQ9BQN1 747 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 SNRNP25Q9BV90 132 aaKnown RBP22.52■■□□□ 1.2
C9orf3-222ENST00000496567 IRX2Q9BZI1 471 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-222ENST00000496567 LINC00597Q9H2U6 94 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 TMPRSS4Q9NRS4 437 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 AMFRQ9UKV5 643 aa22.52■■□□□ 1.2
C9orf3-222ENST00000496567 C19orf67A6NJJ6 358 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 KIF5CO60282 957 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 GDI1P31150 447 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 FAM133BQ5BKY9 247 aaKnown RBP22.51■■□□□ 1.19
C9orf3-222ENST00000496567 PIK3R6Q5UE93 754 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 NADSYN1Q6IA69 706 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 CYP4V2Q6ZWL3 525 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-222ENST00000496567 ADGRG2Q8IZP9 1017 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 SLC44A3Q8N4M1 653 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.51■■□□□ 1.19
C9orf3-222ENST00000496567 OR12D3Q9UGF7 316 aa22.51■■□□□ 1.19
C9orf3-222ENST00000496567 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.51■■□□□ 1.19
C9orf3-222ENST00000496567 F5H5T6 163 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 PSTPIP1O43586 416 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 NFATC1O95644 943 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 RARAP10276 462 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 TACR2P21452 398 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 MSNP26038 577 aaKnown RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 GJC1P36383 396 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 NRG1Q02297 640 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 SMTNL2Q2TAL5 461 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 EML3Q32P44 896 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 KCNT1Q5JUK3 1230 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 RAP1GAP2Q684P5 730 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 LRRC31Q6UY01 552 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 NT5DC3Q86UY8 548 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 IRF7Q92985 503 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 PRMT1Q99873 361 aaKnown RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 DHX35Q9H5Z1 703 aaKnown RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 BRD9Q9H8M2 597 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 KIF26AQ9ULI4 1882 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 GOLGA6L7A0A1B0GV03 622 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 ASGR2P07307 311 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 AUHQ13825 339 aaKnown RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 ZFYVE27Q5T4F4 411 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 TXNRD3NBQ6F5E7 133 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 HSPH1Q92598 858 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 ASIC4Q96FT7 647 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 ZFYVE19Q96K21 471 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 SPHK2Q9NRA0 654 aa22.5■■□□□ 1.19
C9orf3-222ENST00000496567 DDX56Q9NY93 547 aaKnown RBP22.5■■□□□ 1.19
C9orf3-222ENST00000496567 CCDC66A2RUB6 948 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 TYW5A2RUC4 315 aaKnown RBP22.49■■□□□ 1.19
C9orf3-222ENST00000496567 MIF4GDA9UHW6 222 aaKnown RBP22.49■■□□□ 1.19
C9orf3-222ENST00000496567 FTCDO95954 541 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 CYBBP04839 570 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 TNNT1P13805 278 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 SLC6A4P31645 630 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 L1CAMP32004 1257 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 ZNF135P52742 658 aaPredicted RBP22.49■■□□□ 1.19
C9orf3-222ENST00000496567 NR1H3Q13133 447 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 TDGQ13569 410 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 TRIM68Q6AZZ1 485 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 LGI2Q8N0V4 545 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 CD101Q93033 1021 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 EPAS1Q99814 870 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.49■■□□□ 1.19
C9orf3-222ENST00000496567 GPATCH2LQ9NWQ4 482 aa22.49■■□□□ 1.19
C9orf3-222ENST00000496567 CTNNA1P35221 906 aaKnown RBP22.48■■□□□ 1.19
C9orf3-222ENST00000496567 DPYSL2Q16555 572 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 MPPE1Q53F39 396 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 ODF2Q5BJF6 829 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 RABGAP1LQ5R372 815 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 FBXL22Q6P050 247 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 RFWD3Q6PCD5 774 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.48■■□□□ 1.19
C9orf3-222ENST00000496567 PYROXD2Q8N2H3 581 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 CPA6Q8N4T0 437 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 TMA16Q96EY4 203 aaKnown RBP22.48■■□□□ 1.19
C9orf3-222ENST00000496567 EBF3Q9H4W6 596 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 VANGL2Q9ULK5 521 aa22.48■■□□□ 1.19
C9orf3-222ENST00000496567 E9PAM4 449 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 GFRA2O00451 464 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 TSPAN3O60637 253 aa22.47■■□□□ 1.19
C9orf3-222ENST00000496567 SRGAP2O75044 1071 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms