RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZBTB21Q9ULJ3 1066 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 COL2A1P02458 1487 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 H3BMQ9 156 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 TBX3O15119 743 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 BPGMP07738 259 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SNRPAP09012 282 aaKnown RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 PTPRAP18433 802 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 PTPN7P35236 360 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ECE1P42892 770 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 MFAP3P55082 362 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 FKBP1BP68106 108 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SPP2Q13103 211 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 PDK1Q15118 436 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 EPC2Q52LR7 807 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SLX4IPQ5VYV7 408 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ZNF280DQ6N043 979 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ANKRD26P1Q6NSI1 321 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 PPP4R4Q6NUP7 873 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 TATDN1Q6P1N9 297 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 DENND5BQ6ZUT9 1274 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 IFNLR1Q8IU57 520 aaPredicted RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 KSR1Q8IVT5 923 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SHKBP1Q8TBC3 707 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 COG8Q96MW5 612 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CDH19Q9H159 772 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CXorf21Q9HAI6 301 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 MAGEE1Q9HCI5 957 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 XAB2Q9HCS7 855 aaKnown RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 CPQQ9Y646 472 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CENPFP49454 3210 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CYP3A7-CYP3A51PA0A087WV96 503 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 MYOCOSA0A1B0GUC4 107 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 MED24O75448 989 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SLITRK3O94933 977 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ATE1O95260 518 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CHEK2O96017 543 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CYP3A7P24462 503 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 KRT76Q01546 638 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 DMPKQ09013 629 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 FLOT2Q14254 428 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 IRAK1BP1Q5VVH5 260 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SETD3Q86TU7 594 aaPredicted RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 SLC26A11Q86WA9 606 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ANKMY2Q8IV38 441 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 PDIK1LQ8N165 341 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 SPERTQ8NA61 448 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 TFB1MQ8WVM0 346 aaKnown RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 SHC3Q92529 594 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 CCDC127Q96BQ5 260 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 MBOAT7Q96N66 472 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 PIGSQ96S52 555 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 ZNF347Q96SE7 839 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 DCUN1D5Q9BTE7 237 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 HEMGNQ9BXL5 484 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 COPS7BQ9H9Q2 264 aaPredicted RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 SUCOQ9UBS9 1254 aaKnown RBP9.31□□□□□ -0.92
HPS4-217ENST00000496385 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
HPS4-217ENST00000496385 M0QX08 132 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 SLC22A2O15244 555 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 COX4I1P13073 169 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 EIF2AK2P19525 551 aaKnown RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 PROZP22891 400 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 GPC3P51654 580 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 TMBIM6P55061 237 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 NLRP11P59045 1033 aaKnown RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 ZNF846Q147U1 533 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 CCDC14Q49A88 953 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 ELMOD1Q8N336 334 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 FIBCD1Q8N539 461 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 FBXO36Q8NEA4 188 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 WNK4Q96J92 1243 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 RMDN3Q96TC7 470 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 EBF4Q9BQW3 602 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 RUSC1Q9BVN2 902 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 CEP44Q9C0F1 390 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 IFT122Q9HBG6 1241 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 CYP4F11Q9HBI6 524 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 DNPEPQ9ULA0 475 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 ATP11BQ9Y2G3 1177 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 DYTNA2CJ06 578 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 BCAS2O75934 225 aaPredicted RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 CHRNB1P11230 501 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 CYP11B1P15538 503 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
HPS4-217ENST00000496385 ITGADQ13349 1161 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 IKBKEQ14164 716 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 MGAT5BQ3V5L5 792 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 SPRYD7Q5W111 196 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 PDPK2PQ6A1A2 396 aa9.3□□□□□ -0.92
HPS4-217ENST00000496385 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms