RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SLC29A4Q7RTT9 530 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 LRRTM4Q86VH4 590 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 CAND1Q86VP6 1230 aaKnown RBP4.27□□□□□ -1.73
CLK1-214ENST00000496205 CHSY1Q86X52 802 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 TMTC1Q8IUR5 882 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 FSTL5Q8N475 847 aaPredicted RBP4.27□□□□□ -1.73
CLK1-214ENST00000496205 IL17REQ8NFR9 667 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 HERVK_113Q902F9 699 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 RUBCNQ92622 972 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PRR11Q96HE9 360 aaPredicted RBP4.27□□□□□ -1.73
CLK1-214ENST00000496205 C5orf34Q96MH7 638 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PDP2Q9P2J9 529 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 GXYLT2A0PJZ3 443 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 H0YIZ8 118 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 SLC16A3O15427 465 aaKnown RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 IRAK2O43187 625 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 WDR47O94967 919 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 CD53P19397 219 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 DRD1P21728 446 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 RALBP1Q15311 655 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 TRIP6Q15654 476 aaKnown RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 MEPCEQ7L2J0 689 aaKnown RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 C2CD5Q86YS7 1000 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 CNGA4Q8IV77 575 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 NRACQ8N912 160 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 PNISRQ8TF01 805 aaKnown RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 ABHD5Q8WTS1 349 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 AFG1LQ8WV93 481 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 UBE2Q2Q8WVN8 375 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 THAP4Q8WY91 577 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 TBC1D5Q92609 795 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 ZSCAN31Q96LW9 406 aaPredicted RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 TRAPPC9Q96Q05 1148 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 PRR25Q96S07 402 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 ARHGAP39Q9C0H5 1083 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 ABHD16BQ9H3Z7 469 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 TAF1DQ9H5J8 278 aaPredicted RBP4.26□□□□□ -1.73
CLK1-214ENST00000496205 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 SAYSD1Q9NPB0 183 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 KIF17Q9P2E2 1029 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 KCND3Q9UK17 655 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 USP22Q9UPT9 525 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 CRYL1Q9Y2S2 319 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 PCDHB7Q9Y5E2 793 aa4.26□□□□□ -1.73
CLK1-214ENST00000496205 LOC105369274A0A096LPK9 316 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 LOC102723532A0A0G2JNH3 316 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 A0A1B0GVC2 190 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 CTIFO43310 598 aaKnown RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 CA12O43570 354 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 SNX2O60749 519 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 PRKCBP05771 671 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 ALADP13716 330 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 TUBP50607 506 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 CCR5P51681 352 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 PSG6Q00889 435 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 SIM2Q14190 667 aaPredicted RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 CLCA4Q14CN2 919 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 AARS2Q5JTZ9 985 aaKnown RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 CCDC70Q6NSX1 233 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 NFRKBQ6P4R8 1299 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 SYT13Q7L8C5 426 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 CCDC117Q8IWD4 279 aaPredicted RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 NRSN1Q8IZ57 195 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 OR4N4Q8N0Y3 316 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 C8orf58Q8NAV2 365 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 RSC1A1Q92681 617 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 TRIM63Q969Q1 353 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 MACROD1Q9BQ69 325 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 ELAC1Q9H777 363 aaKnown RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 SAP30LQ9HAJ7 183 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 G6PC2Q9NQR9 355 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 DLL3Q9NYJ7 618 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 IFT80Q9P2H3 777 aaPredicted RBP4.25□□□□□ -1.73
CLK1-214ENST00000496205 GABRQQ9UN88 632 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 RCE1Q9Y256 329 aa4.25□□□□□ -1.73
CLK1-214ENST00000496205 MYMKA6NI61 221 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 SLC38A8A6NNN8 435 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 BCAR3O75815 825 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 KRT38O76015 456 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 TK1P04183 234 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 EIF4A1P60842 406 aaKnown RBP4.24□□□□□ -1.73
CLK1-214ENST00000496205 E2F1Q01094 437 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 ATPAF1Q5TC12 328 aaPredicted RBP4.24□□□□□ -1.73
CLK1-214ENST00000496205 JAKMIP3Q5VZ66 844 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 ANKRD16Q6P6B7 361 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 C16orf89Q6UX73 402 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 DLK2Q6UY11 383 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 TRABD2AQ86V40 505 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 HEATR4Q86WZ0 1026 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 NANOGP1Q8N7R0 232 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 XAGE5Q8WWM1 108 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 NPIPB3Q92617 1050 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms