RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TLE3Q04726 772 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 TRIP4Q15650 581 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 TTC31Q49AM3 519 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 HES3Q5TGS1 186 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 LAYNQ6UX15 382 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 SCARA5Q6ZMJ2 495 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 UNC13DQ70J99 1090 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 ADIPOR2Q86V24 386 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 DENND1CQ8IV53 801 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 PDILTQ8N807 584 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 PLD4Q96BZ4 506 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 RASAL2Q9UJF2 1139 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 TPX2Q9ULW0 747 aaKnown RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 NCKAP1Q9Y2A7 1128 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 PDCP20941 246 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 ASPAP45381 313 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 RXRGP48443 463 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 ASIC1P78348 528 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 IL9RQ01113 521 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 EFEMP1Q12805 493 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
COL1A1-209ENST00000495677 DNAJC3Q13217 504 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 GATAD2AQ86YP4 633 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 AHI1Q8N157 1196 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 ARHGAP18Q8N392 663 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 GOLGA5Q8TBA6 731 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 NT5C1AQ9BXI3 368 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 IRX2Q9BZI1 471 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-209ENST00000495677 ERVMER34-1Q9H9K5 563 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 CYP3A43Q9HB55 503 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 MARCH2Q9P0N8 246 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 STRIP2Q9ULQ0 834 aa14.05□□□□□ -0.16
COL1A1-209ENST00000495677 A0A1W2PR77 199 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 LATS1O95835 1130 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 WNT1P04628 370 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 ATP5BP06576 529 aaKnown RBP14.04□□□□□ -0.16
COL1A1-209ENST00000495677 DLDP09622 509 aaKnown RBP14.04□□□□□ -0.16
COL1A1-209ENST00000495677 ABCB4P21439 1286 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 CD38P28907 300 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 GALCP54803 685 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 RHDQ02161 417 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 TBC1D25Q3MII6 688 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 PKDCCQ504Y2 493 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 FNDC3BQ53EP0 1204 aaKnown RBP14.04□□□□□ -0.16
COL1A1-209ENST00000495677 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 MPP7Q5T2T1 576 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 ZNF776Q68DI1 518 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-209ENST00000495677 SV2AQ7L0J3 742 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 CHST9Q7L1S5 443 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 SPACA3Q8IXA5 215 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 TMC2Q8TDI7 906 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 TWNKQ96RR1 684 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 RSPH9Q9H1X1 276 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-209ENST00000495677 EBF2Q9HAK2 575 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 ADAMTS1Q9UHI8 967 aa14.04□□□□□ -0.16
COL1A1-209ENST00000495677 PVALEFA0A1B0GWK0 134 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 SLC12A8A0AV02 714 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 CYSRT1A8MQ03 144 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 CBX4O00257 560 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 BRINP1O60477 761 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 HMBSP08397 361 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 SLFN14P0C7P3 912 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 CKMT2P17540 419 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 ACP1P24666 158 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 CCR5P51681 352 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 ARID5BQ14865 1188 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 PPP1R26Q5T8A7 1209 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-209ENST00000495677 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 PM20D1Q6GTS8 502 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 ERICH1Q86X53 443 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 OXR1Q8N573 874 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 EID2Q8N6I1 236 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 DCBLD1Q8N8Z6 715 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 CYB5D2Q8WUJ1 264 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 SNRNP27Q8WVK2 155 aaKnown RBP14.03□□□□□ -0.16
COL1A1-209ENST00000495677 JAKMIP2Q96AA8 810 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 TMA16Q96EY4 203 aaKnown RBP14.03□□□□□ -0.16
COL1A1-209ENST00000495677 FAXDC2Q96IV6 333 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 DNAI2Q9GZS0 605 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 PABPC3Q9H361 631 aaKnown RBP14.03□□□□□ -0.16
COL1A1-209ENST00000495677 MAGEF1Q9HAY2 307 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 GDF3Q9NR23 364 aa14.03□□□□□ -0.16
COL1A1-209ENST00000495677 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 PABPC1P11940 636 aaKnown RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 EPHA8P29322 1005 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 NASPP49321 788 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 ARRB1P49407 418 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 HARS2P49590 506 aaKnown RBP14.02□□□□□ -0.17
COL1A1-209ENST00000495677 UCNP55089 124 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms