RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	PLA2G2C	Q5R387	149 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	FKBP15	Q5T1M5	1219 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	PMS2CL	Q68D20	193 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	OR6B2	Q6IFH4	312 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	SLC26A9	Q7LBE3	791 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	C11orf74	Q86VG3	221 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	DEFB106A	Q8N104	65 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	FRMD1	Q8N878	549 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	TMEM35B	Q8NCS4	154 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	ZNF397	Q8NF99	534 aa	Predicted RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	WFDC5	Q8TCV5	224 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	EPS8L1	Q8TE68	723 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	RLN3	Q8WXF3	142 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	RMDN1	Q96DB5	314 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	NUCKS1	Q9H1E3	243 aa	Known RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	ARRDC1-AS1	Q9H2J1	176 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	ABCB8	Q9NUT2	735 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	XPO7	Q9UIA9	1087 aa	Known RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	MBD1	Q9UIS9	605 aa	Predicted RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	NOCT	Q9UK39	431 aa	Known RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	USP18	Q9UMW8	372 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	DAAM1	Q9Y4D1	1078 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	PCDHGA5	Q9Y5G8	931 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	RAD54B	Q9Y620	910 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	STON1	Q9Y6Q2	735 aa		11.37	□□□□□ -0.59
DCTN1-223	ENST00000495643	CACNA1A	O00555	2505 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	KCNU1	A8MYU2	1149 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	PRR5-ARHGAP8	B1AHC4	643 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	TBL1X	O60907	577 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	GRAP2	O75791	330 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	LSM8	O95777	96 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	MME	P08473	750 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ZNF806	P0C7X5	589 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	NDUFV2	P19404	249 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	CDK11B	P21127	795 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	GBP1	P32455	592 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	IL12RB1	P42701	662 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	POLR2F	P61218	127 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ARHGAP8	P85298	464 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	CDK17	Q00537	523 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	LMNB2	Q03252	620 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ZNF234	Q14588	700 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	SYCP1	Q15431	976 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ELF2	Q15723	593 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ANO6	Q4KMQ2	910 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	MS4A13	Q5J8X5	152 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	TAF3	Q5VWG9	929 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	CAVIN1	Q6NZI2	390 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	PRR23C	Q6ZRP0	262 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ADIPOR2	Q86V24	386 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ZDHHC17	Q8IUH5	632 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	PGBD3	Q8N328	593 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	AOPEP	Q8N6M6	819 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	HJURP	Q8NCD3	748 aa	Predicted RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ANKRD20A12P	Q8NF67	263 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	FIBIN	Q8TAL6	211 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	UCMA	Q8WVF2	138 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	SORCS1	Q8WY21	1168 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	LMLN	Q96KR4	655 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	BTN2A3P	Q96KV6	586 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	ERGIC2	Q96RQ1	377 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	PRMT1	Q99873	361 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	DDX50	Q9BQ39	737 aa	Known RBP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	BPIFA3	Q9BQP9	254 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	SYNC	Q9H7C4	482 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	NLRC4	Q9NPP4	1024 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	DLL3	Q9NYJ7	618 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	GGA2	Q9UJY4	613 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	CEP83	Q9Y592	693 aa		11.36	□□□□□ -0.59
DCTN1-223	ENST00000495643	BCLAF3	A2AJT9	711 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	DAB1	O75553	588 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	GFPT2	O94808	682 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	MOCS2	O96007	188 aa	Predicted RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	APOE	P02649	317 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SLC2A3	P11169	496 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	PABPC1	P11940	636 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	ATP1A3	P13637	1013 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CHRNB2	P17787	502 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CD70	P32970	193 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	NOS2	P35228	1153 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SOX5	P35711	763 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SCNN1A	P37088	669 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	RPS24	P62847	133 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	NOMO3	P69849	1222 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	UBXN1	Q04323	297 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	BYSL	Q13895	437 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	E2F5	Q15329	346 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CCDC6	Q16204	474 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	FUT11	Q495W5	492 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	OTUD1	Q5VV17	481 aa	Predicted RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CHST9	Q7L1S5	443 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	ERICH1	Q86X53	443 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms