RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
CSNK1E-213ENST00000495232 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
CSNK1E-213ENST00000495232 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 SHISA7A6NL88 538 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 PI15O43692 258 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 CACNG3O60359 315 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TBL1XO60907 577 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TULP3O75386 442 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 CHRNB1P11230 501 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TFE3P19532 575 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 OPRD1P41143 372 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 GRIA2P42262 883 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 DGKGP49619 791 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 CXCR3P49682 368 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 RPL7AP62424 266 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 KDSRQ06136 332 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 C15orf59Q2T9L4 293 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 PIK3R6Q5UE93 754 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 FYB2Q5VWT5 728 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 PLEKHA7Q6IQ23 1121 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TRNP1Q6NT89 227 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 RFWD3Q6PCD5 774 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 FAM131BQ86XD5 332 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 LGI2Q8N0V4 545 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TMEM105Q8N8V8 129 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 SPC24Q8NBT2 197 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 HJURPQ8NCD3 748 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 FAM172AQ8WUF8 416 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 PANX2Q96RD6 677 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 SIK2Q9H0K1 926 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 THAP2Q9H0W7 228 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 STIM2Q9P246 746 aa12.52□□□□□ -0.41
CSNK1E-213ENST00000495232 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 PAGE1O75459 146 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 RNF8O76064 485 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 ENDOD1O94919 500 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 KAT7O95251 611 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 IPO7O95373 1038 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 EGFP01133 1207 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 PENKP01210 267 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 H2AFZP0C0S5 128 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 TACR2P21452 398 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 PSMA2P25787 234 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 SLC6A4P31645 630 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 ATXN1P54253 815 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 GALCP54803 685 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 CCINQ13939 588 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 MPP7Q5T2T1 576 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 TTC39BQ5VTQ0 682 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 FSTL4Q6MZW2 842 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 SCYL2Q6P3W7 929 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 H2AFVQ71UI9 128 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 C12orf40Q86WS4 652 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 ETFBKMTQ8IXQ9 262 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 CLDN23Q96B33 292 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 IER2Q9BTL4 223 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 SLC2A11Q9BYW1 496 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 SPATA6Q9NWH7 488 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 XPO7Q9UIA9 1087 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 F5P12259 2224 aa12.51□□□□□ -0.41
CSNK1E-213ENST00000495232 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CCP110O43303 1012 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 ATG13O75143 517 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 RNF40O75150 1001 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 HOXD9P28356 352 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 TNFRSF4P43489 277 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 NUBP1P53384 320 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CDH18Q13634 790 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 SPA17Q15506 151 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 SH3PXD2AQ5TCZ1 1133 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 TMTC1Q8IUR5 882 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 MFN1Q8IWA4 741 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CCDC170Q8IYT3 715 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CFAP52Q8N1V2 620 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 CARNMT1Q8N4J0 409 aa12.5□□□□□ -0.41
CSNK1E-213ENST00000495232 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms