RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 TIPINQ9BVW5 301 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 ZNF518BQ9C0D4 1074 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 TMEM245Q9H330 911 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 PABPC3Q9H361 631 aaKnown RBP15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 CYLDQ9NQC7 956 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 PRSS16Q9NQE7 514 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 ZNF71Q9NQZ8 489 aaPredicted RBP15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 PCDHGA7Q9Y5G6 932 aa15.29■□□□□ 0.04
CHMP2B-205ENST00000494980 CCDC187A0A096LP49 1063 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 H0YCG3 227 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 CCR5P51681 352 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 TOB2Q14106 344 aaPredicted RBP15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 MAMDC2Q7Z304 686 aaPredicted RBP15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 LRRC52Q8N7C0 313 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 GOLGA1Q92805 767 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 TUBD1Q9UJT1 453 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 CLEC4EQ9ULY5 219 aa15.28■□□□□ 0.04
CHMP2B-205ENST00000494980 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 SEMA7AO75326 666 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 KRT7P08729 469 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 GIMD1P0DJR0 217 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 PGFP49763 221 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 NAPEPLDQ6IQ20 393 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 CRTC1Q6UUV9 634 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 Q6ZNB5 142 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 MOCOSQ96EN8 888 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 ELOVL4Q9GZR5 314 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 CAAP1Q9H8G2 361 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 EVA1BQ9NVM1 165 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
CHMP2B-205ENST00000494980 A0A1W2PP55 124 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 C10orf142B7Z368 130 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 TISP43B9A030 160 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 CLDN5O00501 218 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 CDKL5O76039 1030 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 KRT19P08727 400 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 ALPPL2P10696 532 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 PDX1P52945 283 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 WNT7BP56706 349 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 NT5DC4Q86YG4 428 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 POM121Q96HA1 1249 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 NEUROG2Q9H2A3 272 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 USP29Q9HBJ7 922 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 SEPT10Q9P0V9 454 aa15.26■□□□□ 0.03
CHMP2B-205ENST00000494980 A0A087X0B3 334 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 TIMM44O43615 452 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 MAGEC1O60732 1142 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 RNASEH2AO75792 299 aaKnown RBP15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 IL18RAPO95256 599 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 GNLYP22749 145 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 SLC5A3P53794 718 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 MLLT10P55197 1068 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 PPP2CBP62714 309 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 PPP2CAP67775 309 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 CDKN3Q16667 212 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 CAPRIN2Q6IMN6 1127 aaKnown RBP15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 IQCHQ86VS3 1027 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 C9orf43Q8TAL5 461 aaPredicted RBP15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 ZNF274Q96GC6 653 aaPredicted RBP15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 NLGN3Q9NZ94 848 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 SEL1LQ9UBV2 794 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 AGO2Q9UKV8 859 aaKnown RBP15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 PLA2G4CQ9UP65 541 aa15.25■□□□□ 0.03
CHMP2B-205ENST00000494980 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 CPED1A4D0V7 1026 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 WIPF3A6NGB9 483 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 ANKRD63C9JTQ0 380 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 K7ENM7 598 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 PLD2O14939 933 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 CASC3O15234 703 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 MID1O15344 667 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 TCEA3O75764 348 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 CLDN1O95832 211 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 HARS2P49590 506 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 SFSWAPQ12872 951 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 ZNF177Q13360 481 aaPredicted RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 GUSBP11Q6P575 273 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 CRELD2Q6UXH1 353 aaPredicted RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 LIMS2Q7Z4I7 341 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 KCNN1Q92952 543 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 KCNB2Q92953 911 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 KCNK16Q96T55 309 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 MTG2Q9H4K7 406 aa15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 LARSQ9P2J5 1176 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-205ENST00000494980 ITGA11Q9UKX5 1188 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms