RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PLEKHA7Q6IQ23 1121 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 FSTL4Q6MZW2 842 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
APTX-230ENST00000494649 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
APTX-230ENST00000494649 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 LGI2Q8N0V4 545 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 FBXL6Q8N531 539 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 CCDC185Q8N715 623 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 EZH1Q92800 747 aaPredicted RBP11.53□□□□□ -0.56
APTX-230ENST00000494649 CD101Q93033 1021 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 NT5C3BQ969T7 300 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 OTUB2Q96DC9 234 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 LMAN1LQ9HAT1 526 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.53□□□□□ -0.56
APTX-230ENST00000494649 VANGL2Q9ULK5 521 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 MIA3Q5JRA6 1907 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 ANKRD62A6NC57 917 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 MAN2B1O00754 1011 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 GPR37L1O60883 481 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 TBL1XO60907 577 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 GSCP56915 257 aaPredicted RBP11.53□□□□□ -0.56
APTX-230ENST00000494649 WFDC5Q8TCV5 224 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 TMA16Q96EY4 203 aaKnown RBP11.53□□□□□ -0.56
APTX-230ENST00000494649 VCPIP1Q96JH7 1222 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 BTN2A3PQ96KV6 586 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 ZNF510Q9Y2H8 683 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 HS3ST4Q9Y661 456 aa11.53□□□□□ -0.56
APTX-230ENST00000494649 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 SRGAP2O75044 1071 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 CYBBP04839 570 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 TACR2P21452 398 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 HOXD9P28356 352 aaPredicted RBP11.52□□□□□ -0.57
APTX-230ENST00000494649 CDC25BP30305 580 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 CXCR3P49682 368 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 ZNF143P52747 638 aaPredicted RBP11.52□□□□□ -0.57
APTX-230ENST00000494649 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.57
APTX-230ENST00000494649 NNTQ13423 1086 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 C2orf27AQ580R0 203 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 EMC10Q5UCC4 262 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
APTX-230ENST00000494649 PKN3Q6P5Z2 889 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 C14orf80Q86SX3 495 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 CPNE8Q86YQ8 564 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 ATP6V0D2Q8N8Y2 350 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 OSGEPQ9NPF4 335 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 C2orf42Q9NWW7 574 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 PCSK1NQ9UHG2 260 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 SLC12A6Q9UHW9 1150 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 NENFQ9UMX5 172 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 VPS13AQ96RL7 3174 aa11.52□□□□□ -0.57
APTX-230ENST00000494649 TBC1D3BA6NDS4 549 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 TMEM191CA6NGB0 347 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 HOXC11O43248 304 aaPredicted RBP11.51□□□□□ -0.57
APTX-230ENST00000494649 RNF40O75150 1001 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 CHRNB1P11230 501 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 TCF4P15884 667 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 AOC1P19801 751 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 FZD5Q13467 585 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 TMEM196Q5HYL7 178 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 ETFBKMTQ8IXQ9 262 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 PYROXD2Q8N2H3 581 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 CTNNBL1Q8WYA6 563 aaPredicted RBP11.51□□□□□ -0.57
APTX-230ENST00000494649 IGSF8Q969P0 613 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 RPRD1AQ96P16 312 aaPredicted RBP11.51□□□□□ -0.57
APTX-230ENST00000494649 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 RRN3Q9NYV6 651 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 CTTNBP2NLQ9P2B4 639 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 MRPS17Q9Y2R5 130 aaKnown RBP11.51□□□□□ -0.57
APTX-230ENST00000494649 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 F5H5T6 163 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 KAT7O95251 611 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 F9P00740 461 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 MYBL1P10243 752 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 SLC2A3P11169 496 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 AVPR2P30518 371 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 PTPN9P43378 593 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 DGKGP49619 791 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 AMPD2Q01433 879 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 AUHQ13825 339 aaKnown RBP11.51□□□□□ -0.57
APTX-230ENST00000494649 CCINQ13939 588 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 GAS6Q14393 721 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 PPP2R5DQ14738 602 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 GEN1Q17RS7 908 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 MPPE1Q53F39 396 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 PPP1R2P3Q6NXS1 205 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 RAD9BQ6WBX8 426 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 ARCQ7LC44 396 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 BNIPLQ7Z465 357 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 FAM217AQ8IXS0 508 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
APTX-230ENST00000494649 CPXM2Q8N436 756 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms