RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PIWIL1Q96J94 861 aaKnown RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 NAA15Q9BXJ9 866 aaKnown RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 SEMA4GQ9NTN9 838 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 A0A1W2PQF6 199 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 TCRBV21S2A2A0A5A6 115 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 CCP110O43303 1012 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 RHOBTB1O94844 696 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 GYPCP04921 128 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 SDHBP21912 280 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 TBX4P57082 545 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 UBXN1Q04323 297 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 E2F5Q15329 346 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 GEN1Q17RS7 908 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 KLHDC7AQ5VTJ3 777 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 SDE2Q6IQ49 451 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 SLC39A13Q96H72 371 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 SPACA7Q96KW9 195 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 POPDC2Q9HBU9 364 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 FHOD1Q9Y613 1164 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 CKAP5Q14008 2032 aa13.71□□□□□ -0.21
ERCC3-209ENST00000494464 FOXN3O00409 490 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 DCLK1O15075 740 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 IRAK2O43187 625 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ACSL4O60488 711 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 IGLV3-25P01717 112 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 GLI1P08151 1106 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PNMA6AP0CW24 399 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 P2RY2P41231 377 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 SLC11A2P49281 568 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 BPIFB4P59827 614 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ENPP2Q13822 863 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.225e-7■■■■■ 30.6
ERCC3-209ENST00000494464 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 FIGNQ5HY92 759 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 MPP7Q5T2T1 576 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ERMP1Q7Z2K6 904 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 TAC4Q86UU9 113 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PASD1Q8IV76 773 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 CCAR2Q8N163 923 aaKnown RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 WDTC1Q8N5D0 677 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 IPO4Q8TEX9 1081 aaKnown RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 UCMAQ8WVF2 138 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 HMGB4Q8WW32 186 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PPP1R13BQ96KQ4 1090 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 FCRL2Q96LA5 508 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 CPXM1Q96SM3 734 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ACOX2Q99424 681 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 BAG1Q99933 345 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 PLCB1Q9NQ66 1216 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.22
ERCC3-209ENST00000494464 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 CEP83Q9Y592 693 aa13.71□□□□□ -0.22
ERCC3-209ENST00000494464 DNAH14Q0VDD8 3507 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 NUP205Q92621 2012 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 THADAQ6YHU6 1953 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 CAPN9O14815 690 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 UCHL3P15374 230 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 GABRG2P18507 467 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 BCKDHBP21953 392 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 GBP1P32455 592 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 KRT9P35527 623 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 MPLP40238 635 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 YWHAZP63104 245 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 BYSLQ13895 437 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 RAPGEF1Q13905 1077 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 MAP7D1Q3KQU3 841 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 FKBP15Q5T1M5 1219 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 E4F1Q66K89 784 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 C1orf131Q8NDD1 294 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 WFIKKN2Q8TEU8 576 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 TMA16Q96EY4 203 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 THAP10Q9P2Z0 257 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 TJP2Q9UDY2 1190 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 DAAM1Q9Y4D1 1078 aa13.7□□□□□ -0.22
ERCC3-209ENST00000494464 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.7□□□□□ -0.22
ERCC3-209ENST00000494464 CEP250Q9BV73 2442 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms