RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	DHCR24	Q15392	516 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SLC44A4	Q53GD3	710 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ERMARD	Q5T6L9	678 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TRNP1	Q6NT89	227 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ZNF662	Q6ZS27	426 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	DDI1	Q8WTU0	396 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ZFYVE19	Q96K21	471 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	NELL2	Q99435	816 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	EPAS1	Q99814	870 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	BBS2	Q9BXC9	721 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	LINC00597	Q9H2U6	94 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MARK1	Q9P0L2	795 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	STIM2	Q9P246	746 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MUTYH	Q9UIF7	546 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ADGRG1	Q9Y653	693 aa		13.61	□□□□□ -0.23
SKIV2L-215	ENST00000494058	DOCK8	Q8NF50	2099 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ARNTL	O00327	626 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	HOXC11	O43248	304 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TACR2	P21452	398 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	PITX1	P78337	314 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	CCZ1B	P86790	482 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	CCZ1	P86791	482 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	NRG1	Q02297	640 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SIGLEC14	Q08ET2	396 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MESD	Q14696	234 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MS4A13	Q5J8X5	152 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	LY6G5C	Q5SRR4	150 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TRIM68	Q6AZZ1	485 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	RHBDF2	Q6PJF5	856 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ZNF852	Q6ZMS4	543 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MAP7D3	Q8IWC1	876 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ACRBP	Q8NEB7	543 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	EDA	Q92838	391 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SIK2	Q9H0K1	926 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	GTSE1	Q9NYZ3	720 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	OR12D3	Q9UGF7	316 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	PIAS3	Q9Y6X2	628 aa		13.6	□□□□□ -0.23
SKIV2L-215	ENST00000494058	UNC80	Q8N2C7	3258 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	GOLGA6L9	A6NEM1	432 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	NEDD8-MDP1	E9PL57	170 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	NCAM2	O15394	837 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SPOP	O43791	374 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	LRCH4	O75427	683 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	CYP17A1	P05093	508 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TYR	P14679	529 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ARSA	P15289	507 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TFE3	P19532	575 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MSN	P26038	577 aa	Known RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MIP	P30301	263 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	OGDH	Q02218	1023 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	AUH	Q13825	339 aa	Known RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	MLF2	Q15773	248 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SH3PXD2A	Q5TCZ1	1133 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	PIK3R6	Q5UE93	754 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	OTUD1	Q5VV17	481 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	RAP1GAP2	Q684P5	730 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	C11orf63	Q6NUN7	778 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TPGS1	Q6ZTW0	290 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	POLN	Q7Z5Q5	900 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	DAAM2	Q86T65	1068 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TMEM25	Q86YD3	366 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	LGI2	Q8N0V4	545 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	RIN3	Q8TB24	985 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	KIAA1524	Q8TCG1	905 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	TEKT4	Q8WW24	435 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	RPRD1A	Q96P16	312 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	NECAB3	Q96P71	396 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	DESI2	Q9BSY9	194 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	OSGEP	Q9NPF4	335 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	HPS4	Q9NQG7	708 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	ARHGEF3	Q9NR81	526 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	DEC1	Q9P2X7	70 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	FZD10	Q9ULW2	581 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	HS3ST4	Q9Y661	456 aa		13.59	□□□□□ -0.23
SKIV2L-215	ENST00000494058	SPECC1L-ADORA2A	F8WAN1	911 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TNFRSF10A	O00220	468 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	DAPK3	O43293	454 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	NARS	O43776	548 aa	Known RBP	13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CLDN11	O75508	207 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PENK	P01210	267 aa	Predicted RBP	13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	L1CAM	P32004	1257 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	GJA4	P35212	333 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TNK2	Q07912	1038 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SLC12A1	Q13621	1099 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	FAM133B	Q5BKY9	247 aa	Known RBP	13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZFYVE27	Q5T4F4	411 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	LRRC38	Q5VT99	294 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RHOT1	Q8IXI2	618 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	WBP2	Q969T9	261 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ASIC4	Q96FT7	647 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ALS2CR12	Q96Q35	445 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PNKP	Q96T60	521 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TRIM7	Q9C029	511 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZYG11B	Q9C0D3	744 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	MFSD1	Q9H3U5	465 aa		13.58	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CATSPERB	Q9H7T0	1116 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms