RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 LLGL1Q15334 1064 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 FAM72AQ5TYM5 149 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 PIK3R6Q5UE93 754 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 KAZNQ674X7 775 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 FAM72DQ6L9T8 149 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 FAM72BQ86X60 149 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 RFX6Q8HWS3 928 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 CMTM8Q8IZV2 173 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ITFG1Q8TB96 612 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ING5Q8WYH8 240 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 PABPC5Q96DU9 382 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 EPAS1Q99814 870 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 HEMGNQ9BXL5 484 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 SLITRK6Q9H5Y7 841 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 CLDND1Q9NY35 253 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 OR12D3Q9UGF7 316 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ARHGAP26Q9UNA1 814 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 SNX10Q9Y5X0 201 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 TCRBV7S2A1N4TA0A589 114 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 CREB3O43889 395 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 TJP3O95049 919 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 LATS1O95835 1130 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 KLKB1P03952 638 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 FSHRP23945 695 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 HTR7P34969 479 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 AVPR1AP37288 418 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 GGCXP38435 758 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 HCAR3P49019 387 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 SLC11A2P49281 568 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MLLT6P55198 1093 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-231ENST00000494043 TPI1P60174 286 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 ZXDBP98169 803 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 DLX2Q07687 328 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-231ENST00000494043 KLF1Q13351 362 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-231ENST00000494043 DPYSQ14117 519 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MS4A13Q5J8X5 152 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MANEALQ5VSG8 457 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 NADSYN1Q6IA69 706 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 RFX8Q6ZV50 586 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 BBS12Q6ZW61 710 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MICALL1Q8N3F8 863 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MNS1Q8NEH6 495 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 PCDH19Q8TAB3 1148 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 MAIP1Q8WWC4 291 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 WBP2Q969T9 261 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 AZIN2Q96A70 460 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 PRMT1Q99873 361 aaKnown RBP11.79□□□□□ -0.52
MCF2L-231ENST00000494043 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 DCLK3Q9C098 648 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 S1PR5Q9H228 398 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 CDH22Q9UJ99 828 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 NEU3Q9UQ49 428 aa11.79□□□□□ -0.52
MCF2L-231ENST00000494043 SZT2Q5T011 3432 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 C2orf16Q68DN1 1984 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 DOCK6Q96HP0 2047 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 KRIT1O00522 736 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ACSL4O60488 711 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 GREM1O60565 184 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CST8O60676 142 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 LRIG2O94898 1065 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 WEE1P30291 646 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 HOXC13P31276 330 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 LTBRP36941 435 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 DYNLT1P63172 113 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ADCY2Q08462 1091 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 TFDP2Q14188 446 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 SIX1Q15475 284 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ARTNQ5T4W7 220 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 RAP1GAP2Q684P5 730 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 SLC9A4Q6AI14 798 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CES5AQ6NT32 575 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 POTEHQ6S545 545 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 Q6ZNB5 142 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CHSY1Q86X52 802 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF683Q8IZ20 524 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 ZDHHC14Q8IZN3 488 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 PQLC3Q8N755 202 aa11.78□□□□□ -0.52
MCF2L-231ENST00000494043 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms