RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 VPS16Q9H269 839 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 MTG2Q9H4K7 406 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 PLXNA2O75051 1894 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 IGHV1OR15-9A0A0B4J2B8 117 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 TBL1XO60907 577 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 HLA-EP13747 358 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 NUMBP49757 651 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 COPAP53621 1224 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 RPS24P62847 133 aaKnown RBP13.11□□□□□ -0.31
HSPG2-212ENST00000493940 RING1Q06587 406 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 KRT31Q15323 416 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 MEA1Q16626 185 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 PTPRNQ16849 979 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 FUT11Q495W5 492 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 PTPN20Q4JDL3 420 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 ZC3H12AQ5D1E8 599 aaKnown RBP13.11□□□□□ -0.31
HSPG2-212ENST00000493940 FSCBQ5H9T9 825 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-212ENST00000493940 MMS22LQ6ZRQ5 1243 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 ABCB8Q9NUT2 735 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 STIM2Q9P246 746 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
HSPG2-212ENST00000493940 TLR6Q9Y2C9 796 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
HSPG2-212ENST00000493940 TPRP12270 2363 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 MED7O43513 233 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 RHOBTB1O94844 696 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 CAVIN2O95810 425 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 LATS1O95835 1130 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 CYBBP04839 570 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ACADSBP45954 432 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 IRX4P78413 519 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 NCAPHQ15003 741 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ELF2Q15723 593 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 APTXQ7Z2E3 356 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 TRMT11Q7Z4G4 463 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 NOP9Q86U38 636 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 MYO19Q96H55 970 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 SLC2A11Q9BYW1 496 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 GANQ9H2C0 597 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 FSCN3Q9NQT6 498 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ANLNQ9NQW6 1124 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 CYP8B1Q9UNU6 501 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 PCDHGA5Q9Y5G8 931 aa13.1□□□□□ -0.31
HSPG2-212ENST00000493940 ATXN2Q99700 1313 aaKnown RBP13.1□□□□□ -0.31
HSPG2-212ENST00000493940 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-212ENST00000493940 IRAK2O43187 625 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-212ENST00000493940 UCHL3P15374 230 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 ITPKAP23677 461 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 IRAK1P51617 712 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 PTK2Q05397 1052 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 DCAF6Q58WW2 860 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 MS4A13Q5J8X5 152 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 TRNP1Q6NT89 227 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 OLFML1Q6UWY5 402 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 NUDT18Q6ZVK8 323 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 BEND5Q7L4P6 421 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.09□□□□□ -0.31
HSPG2-212ENST00000493940 PIGKQ92643 395 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
HSPG2-212ENST00000493940 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms