RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 A0A1W2PQF6 199 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 RETP07949 1114 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 SLC2A3P11169 496 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 GBP1P32455 592 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 NOS2P35228 1153 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 FMO1Q01740 532 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 XYLT1Q86Y38 959 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 DCLK2Q8N568 766 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 FAM160A2Q8N612 972 aaPredicted RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 ZNF557Q8N988 423 aaPredicted RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 OLIG1Q8TAK6 271 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 WFIKKN2Q8TEU8 576 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 UCMAQ8WVF2 138 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 ZC3H10Q96K80 434 aaKnown RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 NUCKS1Q9H1E3 243 aaKnown RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 CD248Q9HCU0 757 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 RTN4Q9NQC3 1192 aaKnown RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 DDIT4Q9NX09 232 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 RRN3Q9NYV6 651 aa23.48■■□□□ 1.35
SNIP1-203ENST00000493916 THAP10Q9P2Z0 257 aaPredicted RBP23.48■■□□□ 1.35
SNIP1-203ENST00000493916 TCRBV21S2A2A0A5A6 115 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 TIMM44O43615 452 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 TBL1XO60907 577 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 MOCS2O96007 188 aaPredicted RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 CYP1A1P04798 512 aaPredicted RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 CHRNB2P17787 502 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 HLA-FP30511 346 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 MATKP42679 507 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 ENPP2Q13822 863 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 USP39Q53GS9 565 aaKnown RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 MS4A13Q5J8X5 152 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 NAA35Q5VZE5 725 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 TRIM72Q6ZMU5 477 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 KIAA0907Q7Z7F0 614 aaPredicted RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 C11orf74Q86VG3 221 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 GPR161Q8N6U8 529 aaKnown RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 LOXL4Q96JB6 756 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 TPSD1Q9BZJ3 242 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 ELOVL2Q9NXB9 296 aa23.47■■□□□ 1.35
SNIP1-203ENST00000493916 XPO7Q9UIA9 1087 aaKnown RBP23.47■■□□□ 1.35
SNIP1-203ENST00000493916 TYW5A2RUC4 315 aaKnown RBP23.46■■□□□ 1.35
SNIP1-203ENST00000493916 KCNU1A8MYU2 1149 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 TEX33O43247 280 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 LRP3O75074 770 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 CCR1P32246 355 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 WASP42768 502 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 EP300Q09472 2414 aaPredicted RBP23.46■■□□□ 1.35
SNIP1-203ENST00000493916 MTA1Q13330 715 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 TMEM215Q68D42 235 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 KBTBD6Q86V97 674 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 ATP6V0D2Q8N8Y2 350 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 HMGB4Q8WW32 186 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 CPA5Q8WXQ8 436 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 CACNA2D2Q9NY47 1150 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 BCCIPQ9P287 314 aaKnown RBP eCLIP23.46■■□□□ 1.35
SNIP1-203ENST00000493916 SLC12A6Q9UHW9 1150 aa23.46■■□□□ 1.35
SNIP1-203ENST00000493916 FILIP1LQ4L180 1135 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 FAM102AQ5T9C2 384 aaPredicted RBP23.45■■□□□ 1.34
SNIP1-203ENST00000493916 OTUD1Q5VV17 481 aaPredicted RBP23.45■■□□□ 1.34
SNIP1-203ENST00000493916 AHI1Q8N157 1196 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 NT5C3BQ969T7 300 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 MYEOVQ96EZ4 313 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 NPY6RQ99463 290 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 ABCB8Q9NUT2 735 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 TMEM51Q9NW97 253 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.45■■□□□ 1.34
SNIP1-203ENST00000493916 GGA2Q9UJY4 613 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 STAP1Q9ULZ2 295 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 STON1Q9Y6Q2 735 aa23.45■■□□□ 1.34
SNIP1-203ENST00000493916 DMXL1Q9Y485 3027 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 A0A1B0GTH6 734 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 CAVIN2O95810 425 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 PABPC1P11940 636 aaKnown RBP23.44■■□□□ 1.34
SNIP1-203ENST00000493916 ABCB4P21439 1286 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 TACR2P21452 398 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 MMP8P22894 467 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 RPS24P62847 133 aaKnown RBP23.44■■□□□ 1.34
SNIP1-203ENST00000493916 PLK5Q496M5 336 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 KIAA1211LQ6NV74 962 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 ARCQ7LC44 396 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 CHSY1Q86X52 802 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 KIAA2013Q8IYS2 634 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 FIBINQ8TAL6 211 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 WFDC5Q8TCV5 224 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 PGAP3Q96FM1 320 aaPredicted RBP23.44■■□□□ 1.34
SNIP1-203ENST00000493916 PRMT1Q99873 361 aaKnown RBP23.44■■□□□ 1.34
SNIP1-203ENST00000493916 CIPCQ9C0C6 399 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 DUSP15Q9H1R2 295 aaPredicted RBP23.44■■□□□ 1.34
SNIP1-203ENST00000493916 CBX8Q9HC52 389 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 MYO6Q9UM54 1294 aa23.44■■□□□ 1.34
SNIP1-203ENST00000493916 SYNJ2BP-COX16A0A087WUM0 186 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 M0QYT0 321 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 DCLK1O15075 740 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 EPN2O95208 641 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 GABRG2P18507 467 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 TGM1P22735 817 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 P2RY2P41231 377 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 IL12RB1P42701 662 aa23.43■■□□□ 1.34
SNIP1-203ENST00000493916 NME3Q13232 169 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms