RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 HPDLQ96IR7 371 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SLC38A2Q96QD8 506 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CHP1Q99653 195 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 EPB41L1Q9H4G0 881 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GPN1Q9HCN4 374 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ABI2Q9NYB9 513 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SAE1Q9UBE0 346 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CDH9Q9ULB4 789 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MROH7-TTC4A0A0A0MT08 1334 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PSMD11O00231 422 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CES2O00748 559 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 EPN2O95208 641 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GHRP10912 638 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PDHA2P29803 388 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ARL3P36405 182 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SLC1A6P48664 564 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GALNT3Q14435 633 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FAM171BQ6P995 826 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TRMT11Q7Z4G4 463 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 LDHDQ86WU2 507 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 OR56A4Q8NGH8 313 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SYN2Q92777 582 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SPACA7Q96KW9 195 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 BTBD9Q96Q07 612 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ZSWIM1Q9BR11 485 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 REEP2Q9BRK0 252 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 BTBD10Q9BSF8 475 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MMADHCQ9H3L0 296 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CCDC177Q9NQR7 707 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PRMT7Q9NVM4 692 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MCUBQ9NWR8 336 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ETAA1Q9NY74 926 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF518AQ6AHZ1 1483 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ERI2A8K979 691 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 F5H6K3 240 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MRASO14807 208 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SASH1O94885 1247 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SEC24AO95486 1093 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 F9P00740 461 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 FGFR1P11362 822 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 KLRC3Q07444 240 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MTAPQ13126 283 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PKN1Q16512 942 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 STRIP1Q5VSL9 837 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ACAD10Q6JQN1 1059 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 BRINP3Q76B58 766 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF276Q8N554 614 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 CASKIN2Q8WXE0 1202 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PPP1R14BQ96C90 147 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 EXO5Q9H790 373 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TDRD3Q9H7E2 651 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TMBIM4Q9HC24 238 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SLC24A2Q9UI40 661 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ANKRD6Q9Y2G4 727 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RGS14O43566 566 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF432O94892 652 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RHOBTB3O94955 611 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RTN3O95197 1032 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 CHRNGP07510 517 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RHOCP08134 193 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 VBP1P61758 197 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MPP3Q13368 585 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZNHIT3Q15649 155 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TCHHL1Q5QJ38 904 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NOTUMQ6P988 496 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF655Q8N720 491 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TSPAN14Q8NG11 270 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MRPS31Q92665 395 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 CRELD1Q96HD1 420 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 GJB4Q9NTQ9 266 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 AKAP7Q9P0M2 348 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MAPRE3Q9UPY8 281 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 FAM50BQ9Y247 325 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 EFR3BQ9Y2G0 817 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 WBP11Q9Y2W2 641 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 CUL7Q14999 1698 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MAGEB16A2A368 324 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RGS10O43665 173 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NMT2O60551 498 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NPY2RP49146 381 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RENBPP51606 427 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 RPL10AP62906 217 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MAPK7Q13164 816 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SPIDRQ14159 915 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PROSER3Q2NL68 480 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 Q4G0T1 1027 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 HIPK1Q86Z02 1210 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 FAM126BQ8IXS8 530 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM159Q96B96 161 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 DGCR14Q96DF8 476 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 AHCYL2Q96HN2 611 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 QRFPRQ96P65 431 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PRDM8Q9NQV8 689 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM216Q9P0N5 145 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 VPS28Q9UK41 221 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms