RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TMPRSS6Q8IU80 811 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 DQX1Q8TE96 717 aaKnown RBP15.24■□□□□ 0.03
ATG4B-223ENST00000493618 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 MYEOVQ96EZ4 313 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 SIPA1Q96FS4 1042 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 TOE1Q96GM8 510 aaKnown RBP15.24■□□□□ 0.03
ATG4B-223ENST00000493618 MED15Q96RN5 788 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 GPR174Q9BXC1 333 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 CYTH4Q9UIA0 394 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 RWDD2AQ9UIY3 292 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 GGA2Q9UJY4 613 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 ANGPTL2Q9UKU9 493 aa15.24■□□□□ 0.03
ATG4B-223ENST00000493618 MEI4A8MW99 385 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 NPC1O15118 1278 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 ACSL4O60488 711 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 LATS1O95835 1130 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 MOCS2O96007 188 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 SERPINF2P08697 491 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 PABPC1P11940 636 aaKnown RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 GNA15P30679 374 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 USP8P40818 1118 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 SLC11A2P49281 568 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 TPMTP51580 245 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 ATXN3P54252 364 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 UBE2HP62256 183 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 GFPT1Q06210 699 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 FOXC1Q12948 553 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 EIF4HQ15056 248 aaKnown RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 PIK3R6Q5UE93 754 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 ADIPOR2Q86V24 386 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 UNC45BQ8IWX7 931 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 CEP76Q8TAP6 659 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 WFIKKN2Q8TEU8 576 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 PRCCQ92733 491 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 ZNF419Q96HQ0 510 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 FCRL2Q96LA5 508 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 CAPN10Q9HC96 672 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 ITM2CQ9NQX7 267 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 WSB2Q9NYS7 404 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 USP36Q9P275 1121 aaKnown RBP15.23■□□□□ 0.03
ATG4B-223ENST00000493618 CNTN6Q9UQ52 1028 aa15.23■□□□□ 0.03
ATG4B-223ENST00000493618 NUMA1Q14980 2115 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 E5RJQ4 531 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 TIMM44O43615 452 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
ATG4B-223ENST00000493618 ACADMP11310 421 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 SPINK2P20155 84 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 HOXD12P35452 270 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 ZNF445P59923 1031 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 PLEKHG6Q3KR16 790 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 SYPL2Q5VXT5 272 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 MBLAC2Q68D91 279 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 TRIM65Q6PJ69 517 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 TAC4Q86UU9 113 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 AHI1Q8N157 1196 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 CARNMT1Q8N4J0 409 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 MINDY1Q8N5J2 469 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 PRICKLE1Q96MT3 831 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-223ENST00000493618 NUCKS1Q9H1E3 243 aaKnown RBP15.22■□□□□ 0.03
ATG4B-223ENST00000493618 MIR1-1HGQ9H1L0 117 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 MTG2Q9H4K7 406 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 TJP2Q9UDY2 1190 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 AJAP1Q9UKB5 411 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-223ENST00000493618 PLXNA2O75051 1894 aa15.22■□□□□ 0.03
ATG4B-223ENST00000493618 ACACBO00763 2458 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 BECN2A8MW95 431 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 PAPSS1O43252 624 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 MED7O43513 233 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 CSRP1P21291 193 aaKnown RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 NUMBP49757 651 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 RPS24P62847 133 aaKnown RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 RING1Q06587 406 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 PTPRNQ16849 979 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 SYCP2LQ5T4T6 812 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 DCAF12L1Q5VU92 463 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 KIAA0907Q7Z7F0 614 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 METTL3Q86U44 580 aaKnown RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 IRF2BP1Q8IU81 584 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 PASD1Q8IV76 773 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 MFN1Q8IWA4 741 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 HDDC3Q8N4P3 179 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 OR2T3Q8NH03 318 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 SERPINB11Q96P15 392 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 TMEM245Q9H330 911 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 XPO7Q9UIA9 1087 aaKnown RBP15.21■□□□□ 0.03
ATG4B-223ENST00000493618 PLA2G4CQ9UP65 541 aa15.21■□□□□ 0.03
ATG4B-223ENST00000493618 SPAARA0A1B0GVQ0 90 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 CAPN9O14815 690 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 OPHN1O60890 802 aa15.2■□□□□ 0.02
ATG4B-223ENST00000493618 CEACAM1P13688 526 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms