RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 F8W810 466 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 VWA5AO00534 786 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ADAMTS3O15072 1205 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 RAD51BO15315 384 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MSI1O43347 362 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CCNT2O60583 730 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 OR7A10O76100 309 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 KCNH1O95259 989 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 H6PDO95479 791 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 TTC4O95801 387 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 PLS3P13797 630 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 STMN1P16949 149 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MAGP20916 626 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CD247P20963 164 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ADRA1DP25100 572 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CHRNA3P32297 505 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 HPCAL1P37235 193 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 HSPA13P48723 471 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 VAC14Q08AM6 782 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF846Q147U1 533 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 DGKDQ16760 1214 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 FAM182AQ5T1J6 154 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 PPP1R26Q5T8A7 1209 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 AGAP7PQ5VUJ5 663 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ARL6IP4Q66PJ3 421 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 SULT1C3Q6IMI6 304 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 TTC33Q6PID6 262 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 GALNT13Q8IUC8 556 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 LCORLQ8N3X6 602 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 FAM109AQ8N4B1 249 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC33Q8N5R6 958 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 FLAD1Q8NFF5 587 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 TTLQ8NG68 377 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 DMRTB1Q96MA1 342 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 KLF6Q99612 283 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 KLQ9UEF7 1012 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF221Q9UK13 617 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 A0A087WXM4 84 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 C16orf96A6NNT2 1141 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 BMP15O95972 392 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 TP53P04637 393 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PRKCBP05771 671 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 HSMCR30P0CW71 290 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PIM1P11309 404 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 CCNA2P20248 432 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 HTR2BP41595 481 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 BFSP2Q13515 415 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 APOFQ13790 326 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 OXA1LQ15070 435 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 DLG2Q15700 870 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FAM214AQ32MH5 1076 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 CYP4A22Q5TCH4 519 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PRR5LQ6MZQ0 368 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 TTC27Q6P3X3 843 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SLC22A16Q86VW1 577 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GRPEL2Q8TAA5 225 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GRIN3AQ8TCU5 1115 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 CEP170P1Q96L14 293 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ALPK1Q96QP1 1244 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 OR2B2Q9GZK3 357 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 CLPBQ9H078 707 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FOXP1Q9H334 677 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 NTN4Q9HB63 628 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GRHL1Q9NZI5 618 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 MKL2Q9ULH7 1088 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 NOSIPQ9Y314 301 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PCDHGA10Q9Y5H3 936 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 OTOFQ9HC10 1997 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ZMYM2Q9UBW7 1377 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FAM237BA0A1B0GVD1 139 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 A8MUA0 341 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FAM25AB3EWG3 89 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FAM25CB3EWG5 89 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 FAM25GB3EWG6 89 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 POLRMTO00411 1230 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RGS13O14921 159 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SPAG6O75602 509 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RSL1D1O76021 490 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 NPPAP01160 153 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 UQCRFS1P1P0C7P4 283 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ADRA2BP18089 450 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 PRDX6P30041 224 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GUCY1A2P33402 732 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SLC26A3P40879 764 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 SLC12A2P55011 1212 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 MRPS22P82650 360 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ACAP2Q15057 778 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ZFP69Q49AA0 526 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ZBED5Q49AG3 693 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 TNFAIP8L3Q5GJ75 292 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 ZC3H7AQ8IWR0 971 aaKnown RBP7.04□□□□□ -1.28
VPS13B-205ENST00000493587 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
VPS13B-205ENST00000493587 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms