RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PPARGP37231 505 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 DPP6P42658 865 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 CLCN2P51788 898 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 PRAMEP78395 509 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 UGCGQ16739 394 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ZNF829Q3KNS6 432 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 PIGGQ5H8A4 983 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SLC2A7Q6PXP3 512 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 GPR141Q7Z602 305 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 PDCD6IPQ8WUM4 868 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 BSNDQ8WZ55 320 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ATP2A3Q93084 1043 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 MOCOSQ96EN8 888 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SLC29A1Q99808 456 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 DHX33Q9H6R0 707 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ACSS2Q9NR19 701 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 NUB1Q9Y5A7 615 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 TRDMT1O14717 391 aaKnown RBP12.02□□□□□ -0.48
HDAC4-210ENST00000493582 LSM1O15116 133 aaKnown RBP12.02□□□□□ -0.48
HDAC4-210ENST00000493582 PLIN3O60664 434 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 OXSR1O95747 527 aaPredicted RBP12.02□□□□□ -0.48
HDAC4-210ENST00000493582 ITGBL1O95965 494 aaPredicted RBP12.02□□□□□ -0.48
HDAC4-210ENST00000493582 MYL4P12829 197 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 UGT1A6P19224 532 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 UGT1A1P22309 533 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 UGT1A4P22310 534 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 HMOX2P30519 316 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 UGT1A3P35503 534 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 UGT1A5P35504 534 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 ZACNQ401N2 412 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 FSCBQ5H9T9 825 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 PPM1JQ5JR12 505 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 CDC42EP5Q6NZY7 148 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 SLC7A5P1Q8MH63 180 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 TTLL6Q8N841 843 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 ZNF781Q8N8C0 355 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 BORCS5Q969J3 196 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 WDR55Q9H6Y2 383 aaPredicted RBP12.02□□□□□ -0.48
HDAC4-210ENST00000493582 KMT5AQ9NQR1 393 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 ZNF358Q9NW07 568 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 SQORQ9Y6N5 450 aa12.02□□□□□ -0.48
HDAC4-210ENST00000493582 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 H7C0C1 242 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 APOC2P02655 101 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 SERPINB2P05120 415 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ADORA2AP29274 412 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ATP5OP48047 213 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ROR1Q01973 937 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 SPIDRQ14159 915 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 XKR9Q5GH70 373 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 DEPDC1BQ8WUY9 529 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 RCN3Q96D15 328 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 KCNH7Q9NS40 1196 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 RBMX2Q9Y388 322 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 NEMP1O14524 444 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 TPP1O14773 563 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 C4BPAP04003 597 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ALDOAP04075 364 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 CALB1P05937 261 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 CDH3P22223 829 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ABCE1P61221 599 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 IKBKEQ14164 716 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 FGD3Q5JSP0 725 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 CARM1Q86X55 608 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 WDTC1Q8N5D0 677 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 LRTOMTQ8WZ04 291 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
HDAC4-210ENST00000493582 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 POLLQ9UGP5 575 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
HDAC4-210ENST00000493582 TNRC6CQ9HCJ0 1690 aaKnown RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 CHADO15335 359 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 KCNN4O15554 427 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 RALBP11234 206 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF12P17014 697 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 PIK3R1P27986 724 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 GABRB3P28472 473 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 BNIP3Q12983 259 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-210ENST00000493582 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
HDAC4-210ENST00000493582 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms