RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 CCDC170Q8IYT3 715 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 PJA1Q8NG27 643 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
RER1-208ENST00000493207 CD101Q93033 1021 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 P2RY13Q9BPV8 354 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 DDX50Q9BQ39 737 aaKnown RBP17.47■□□□□ 0.39
RER1-208ENST00000493207 CNPY3Q9BT09 278 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 TRIM7Q9C029 511 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 ANLNQ9NQW6 1124 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 FAM170BA6NMN3 283 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PRR33A8MZF0 331 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PAGE1O75459 146 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PENKP01210 267 aaPredicted RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 H2AFZP0C0S5 128 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 DESP17661 470 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 TACR2P21452 398 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PSMA2P25787 234 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 TARSP26639 723 aaKnown RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 HDAC4P56524 1084 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 KDSRQ06136 332 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 MPPE1Q53F39 396 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PIK3R6Q5UE93 754 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 H2AFVQ71UI9 128 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 BMP8AQ7Z5Y6 402 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 LGI2Q8N0V4 545 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 FBXL6Q8N531 539 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 TMA16Q96EY4 203 aaKnown RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 MYEOVQ96EZ4 313 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 PRICKLE1Q96MT3 831 aaPredicted RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 BAG1Q99933 345 aaPredicted RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 FBRSL1Q9HCM7 1045 aaKnown RBP17.46■□□□□ 0.39
RER1-208ENST00000493207 TMPRSS4Q9NRS4 437 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 SIT1Q9Y3P8 196 aa17.46■□□□□ 0.39
RER1-208ENST00000493207 I6L893 689 aaPredicted RBP17.45■□□□□ 0.38
RER1-208ENST00000493207 GFRA2O00451 464 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 PI15O43692 258 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 CACNG3O60359 315 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 TMEM253P0C7T8 217 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
RER1-208ENST00000493207 GGCXP38435 758 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 ZNF252P-AS1Q0IIN9 211 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 GRSF1Q12849 480 aaKnown RBP eCLIP17.45■□□□□ 0.38
RER1-208ENST00000493207 MTA1Q13330 715 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 TMEM196Q5HYL7 178 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 ASTLQ6HA08 431 aaPredicted RBP17.45■□□□□ 0.38
RER1-208ENST00000493207 FSTL4Q6MZW2 842 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 ETFBKMTQ8IXQ9 262 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 CCDC105Q8IYK2 499 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 EXOC4Q96A65 974 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 NELL2Q99435 816 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 PRMT1Q99873 361 aaKnown RBP17.45■□□□□ 0.38
RER1-208ENST00000493207 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 DNAJC17Q9NVM6 304 aaKnown RBP17.45■□□□□ 0.38
RER1-208ENST00000493207 CTTNBP2NLQ9P2B4 639 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 HS3ST4Q9Y661 456 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 CUL9Q8IWT3 2517 aa17.45■□□□□ 0.38
RER1-208ENST00000493207 KMT2EQ8IZD2 1858 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 F5H5T6 163 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 TBL1XO60907 577 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 TULP3O75386 442 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 EGFP01133 1207 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 DCNP07585 359 aaKnown RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 AOC1P19801 751 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 HOXD9P28356 352 aaPredicted RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 EIF2DP41214 584 aaKnown RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 MRE11P49959 708 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 GSDMDP57764 484 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 MESP2Q0VG99 397 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 SCYL2Q6P3W7 929 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 CFAP52Q8N1V2 620 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 CCDC185Q8N715 623 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 HJURPQ8NCD3 748 aaPredicted RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 ZNF564Q8TBZ8 553 aaPredicted RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 FNIP1Q8TF40 1166 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 BTBD6Q96KE9 485 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 PNKPQ96T60 521 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 OSBPL6Q9BZF3 934 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 RBM12Q9NTZ6 932 aaKnown RBP17.44■□□□□ 0.38
RER1-208ENST00000493207 STIM2Q9P246 746 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 DEC1Q9P2X7 70 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 ANAPC7Q9UJX3 599 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 SNX10Q9Y5X0 201 aa17.44■□□□□ 0.38
RER1-208ENST00000493207 TYW5A2RUC4 315 aaKnown RBP17.43■□□□□ 0.38
RER1-208ENST00000493207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.43■□□□□ 0.38
RER1-208ENST00000493207 TRIM24O15164 1050 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 NDUFA10O95299 355 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 LCA5LO95447 670 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 DRD1P21728 446 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 MAGEA1P43355 309 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 DGKGP49619 791 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 CLCN5P51795 746 aa17.43■□□□□ 0.38
RER1-208ENST00000493207 RPS24P62847 133 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms