RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PRSS55Q6UWB4 352 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 RSPO2Q6UXX9 243 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 ARHGEF18Q6ZSZ5 1173 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 DENND5BQ6ZUT9 1274 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 NECAB2Q7Z6G3 386 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 CMTR2Q8IYT2 770 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 RNF168Q8IYW5 571 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 PDIK1LQ8N165 341 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 VPS52Q8N1B4 723 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 CCDC110Q8TBZ0 833 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 HTR3CQ8WXA8 447 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 TLCD1Q96CP7 247 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 PGM2Q96G03 612 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 IGSF21Q96ID5 467 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 SPATA13Q96N96 652 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 ZNF558Q96NG5 402 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 HAPLN3Q96S86 360 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 CCDC77Q9BR77 488 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 HERC2P3Q9BVR0 1158 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 FRMD8Q9BZ67 464 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 OLA1Q9NTK5 396 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 IL37Q9NZH6 218 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 SFMBT1Q9UHJ3 866 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 SNX10Q9Y5X0 201 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 BACE2Q9Y5Z0 518 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 OBSL1O75147 1896 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 PLXNA4Q9HCM2 1894 aa9.44□□□□□ -0.9
SMARCC1-208ENST00000492896 ANAPC1Q9H1A4 1944 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TCRBV7S3A2A0A539 114 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAM92AA1XBS5 289 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 E7ESA3 106 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAM72CH0Y354 149 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 ALOX15BO15296 676 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 MSI1O43347 362 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TCEA3O75764 348 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 SOAT2O75908 522 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 LRIG2O94898 1065 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 VNN2O95498 520 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 EFEMP2O95967 443 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 AGTP01019 485 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TSHRP16473 764 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CAPN2P17655 700 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 LAG3P18627 525 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TPSB2P20231 275 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 MX2P20592 715 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 EPHB2P29323 1055 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 ATP5DP30049 168 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 PHBP35232 272 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FDFT1P37268 417 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 MAGEA6P43360 314 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 GLUD2P49448 558 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 PSEN1P49768 467 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 USP46P62068 366 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 DEFB103AP81534 67 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 GAD2Q05329 585 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 AP1B1Q10567 949 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FASTKD3Q14CZ7 662 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TPSAB1Q15661 275 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 BBS9Q3SYG4 887 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAXCQ5TGI0 409 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC8B1Q6J4K2 584 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 KIAA1841Q6NSI8 718 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TAS1R1Q7RTX1 841 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CCDC13Q8IYE1 715 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 ZBED8Q8IZ13 594 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC39A11Q8N1S5 342 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 RIBC1Q8N443 379 aaPredicted RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CCDC33Q8N5R6 958 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 ATP11CQ8NB49 1132 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 FBXO22Q8NEZ5 403 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 LRRN4Q8WUT4 740 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TOP1MTQ969P6 601 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TMEM169Q96HH4 297 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CEP295NLQ96MC4 621 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 SERPINB12Q96P63 405 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 BRD8Q9H0E9 1235 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CRISPLD1Q9H336 500 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 VPS37BQ9H9H4 285 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 RC3H2Q9HBD1 1191 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 LRRC4CQ9HCJ2 640 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 TLR8Q9NR97 1041 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 OR12D3Q9UGF7 316 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 CDY1Q9Y6F8 540 aa9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-208ENST00000492896 WDR27A2RRH5 827 aa9.42□□□□□ -0.9
SMARCC1-208ENST00000492896 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms