RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ELMO3	Q96BJ8	720 aa		20.14	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	GDF3	Q9NR23	364 aa		20.14	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	HMGXB4	Q9UGU5	601 aa		20.14	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SCML1	Q9UN30	329 aa		20.14	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	UBE4B	O95155	1302 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ATP5B	P06576	529 aa	Known RBP	20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	GLDC	P23378	1020 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CD38	P28907	300 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CLDN10	P78369	228 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	KCNC4	Q03721	635 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	BROX	Q5VW32	411 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ZNF776	Q68DI1	518 aa	Predicted RBP	20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	USP30	Q70CQ3	517 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CHST9	Q7L1S5	443 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	C12orf56	Q8IXR9	622 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ARHGAP18	Q8N392	663 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SLC6A18	Q96N87	628 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	LGMN	Q99538	433 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	DNAI2	Q9GZS0	605 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	AASDHPPT	Q9NRN7	309 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	MARCH2	Q9P0N8	246 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CLCA2	Q9UQC9	943 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	USP3	Q9Y6I4	520 aa		20.13	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SLC12A8	A0AV02	714 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	KIF20A	O95235	890 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	VNN1	O95497	513 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CKMT2	P17540	419 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	HLA-F	P30511	346 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	GALC	P54803	685 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	UCN	P55089	124 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ASIC1	P78348	528 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CEBPZ	Q03701	1054 aa	Known RBP	20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SHB	Q15464	509 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	RSRC2	Q7L4I2	434 aa	Known RBP	20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ERICH1	Q86X53	443 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	FAM217A	Q8IXS0	508 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ZNF248	Q8NDW4	579 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	NT5C1A	Q9BXI3	368 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	FBXL12	Q9NXK8	326 aa		20.12	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	LRRIQ3	A6PVS8	624 aa	Predicted RBP	20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334		B8ZZF3	427 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ARHGAP6	O43182	974 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	DLD	P09622	509 aa	Known RBP	20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ZNF445	P59923	1031 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PLEKHO2	Q8TD55	490 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PLD4	Q96BZ4	506 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TMA16	Q96EY4	203 aa	Known RBP	20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ARID3A	Q99856	593 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	DUSP16	Q9BY84	665 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ABCB8	Q9NUT2	735 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	KBTBD4	Q9NVX7	518 aa		20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TFIP11	Q9UBB9	837 aa	Known RBP	20.11	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	LRRC72	A6NJI9	287 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	RNASEH1	O60930	286 aa	Known RBP	20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	WNT1	P04628	370 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	HOXD9	P28356	352 aa	Predicted RBP	20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	HARS2	P49590	506 aa	Known RBP	20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TMPRSS3	P57727	454 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	E2F1	Q01094	437 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PKDCC	Q504Y2	493 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SLC45A4	Q5BKX6	768 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ADIPOR2	Q86V24	386 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	AHI1	Q8N157	1196 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	DCBLD1	Q8N8Z6	715 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	RFFL	Q8WZ73	363 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	RSPH9	Q9H1X1	276 aa	Predicted RBP	20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PABPC3	Q9H361	631 aa	Known RBP	20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CUEDC2	Q9H467	287 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ERVMER34-1	Q9H9K5	563 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ADAMTS1	Q9UHI8	967 aa		20.1	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	VPS37C	A5D8V6	355 aa	Predicted RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PABPC1	P11940	636 aa	Known RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	POLR2E	P19388	210 aa	Known RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	EPHA8	P29322	1005 aa	Predicted RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	RXRG	P48443	463 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	KNOP1	Q1ED39	458 aa	Known RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	MBLAC2	Q68D91	279 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CNNM4	Q6P4Q7	775 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	NCEH1	Q6PIU2	408 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	OXR1	Q8N573	874 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	FAM181A	Q8N9Y4	354 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	GOLGA5	Q8TBA6	731 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	GGA2	Q9UJY4	613 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	MYLK	Q15746	1914 aa		20.09	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TLR4	O00206	839 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ASS1	P00966	412 aa	Known RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	C6	P13671	934 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ASPA	P45381	313 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	PCBP4	P57723	403 aa	Known RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	INCA1	Q0VD86	236 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	BNIP3	Q12983	259 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	SLC39A14	Q15043	492 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TRIP4	Q15650	581 aa	Predicted RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ZACN	Q401N2	412 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ARHGAP40	Q5TG30	622 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	FMNL3	Q8IVF7	1028 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	LSMEM2	Q8N112	164 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	OR2T34	Q8NGX1	318 aa		20.08	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms