RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 KLRC2P26717 231 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 GABRB2P47870 512 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 XYLT1Q86Y38 959 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 SRRM1Q8IYB3 904 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 ZCCHC9Q8N567 271 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 SCAMP5Q8TAC9 235 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 C9orf72Q96LT7 481 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 NGRNQ9NPE2 291 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 SSX2IPQ9Y2D8 614 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 TCRBV5S1A1TA0A578 114 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 TNFRSF10BO14763 440 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 PAPSS1O43252 624 aaPredicted RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 ABHD2P08910 425 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 HAPLN1P10915 354 aaPredicted RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 ADIGQ0VDE8 80 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 TBC1D1Q86TI0 1168 aaPredicted RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 STK32AQ8WU08 396 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 MAGEB18Q96M61 343 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 PARVAQ9NVD7 372 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 GEMIN8Q9NWZ8 242 aaKnown RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 MYO16Q9Y6X6 1858 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 SOX1O00570 391 aaPredicted RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 MAGEA11P43364 429 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 P3H1Q32P28 736 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 GALNTL6Q49A17 601 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 RAB41Q5JT25 222 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 TPGS2Q68CL5 300 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 LILRA6Q6PI73 481 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 PPP1R21Q6ZMI0 780 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 FAM183BPQ6ZVS7 135 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 RIBC1Q8N443 379 aaPredicted RBP23.56■■□□□ 1.36
USF3-203ENST00000491165 FEZF2Q8TBJ5 459 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 CCHCR1Q8TD31 782 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 RBM15Q96T37 977 aaKnown RBP eCLIP23.56■■□□□ 1.36
USF3-203ENST00000491165 MIS12Q9H081 205 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 ZNF576Q9H609 170 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 CYP4F11Q9HBI6 524 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 NOD2Q9HC29 1040 aa23.56■■□□□ 1.36
USF3-203ENST00000491165 EZRP15311 586 aaKnown RBP23.55■■□□□ 1.36
USF3-203ENST00000491165 MAGEA4P43358 317 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 USP46P62068 366 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 SMARCB1Q12824 385 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 TAF5Q15542 800 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 ANKS1BQ7Z6G8 1248 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 RBM23Q86U06 439 aaKnown RBP23.55■■□□□ 1.36
USF3-203ENST00000491165 C2orf15Q8WU43 125 aaKnown RBP23.55■■□□□ 1.36
USF3-203ENST00000491165 KCTD13Q8WZ19 329 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 HSFY1Q96LI6 401 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 IP6K2Q9UHH9 426 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 GGT7Q9UJ14 662 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 DOCK6Q96HP0 2047 aa23.55■■□□□ 1.36
USF3-203ENST00000491165 ADH1AP07327 375 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 CLCN4P51793 760 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 SLC5A3P53794 718 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 SLC8A3P57103 927 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 NCALDP61601 193 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 ZKSCAN8Q15776 578 aaPredicted RBP23.54■■□□□ 1.36
USF3-203ENST00000491165 RBM41Q96IZ5 413 aaKnown RBP23.54■■□□□ 1.36
USF3-203ENST00000491165 TTYH1Q9H313 450 aaPredicted RBP23.54■■□□□ 1.36
USF3-203ENST00000491165 SYNCQ9H7C4 482 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 ECT2Q9H8V3 914 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 EURLQ9NYK6 297 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 BAIAP2L1Q9UHR4 511 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 TKTL1P51854 596 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 CREMQ03060 361 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 RIPK1Q13546 671 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 OLFML1Q6UWY5 402 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 RCOR2Q8IZ40 523 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 CFAP57Q96MR6 1250 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 MCM8Q9UJA3 840 aa23.54■■□□□ 1.36
USF3-203ENST00000491165 LIASO43766 372 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 IFRD2Q12894 506 aaPredicted RBP23.53■■□□□ 1.36
USF3-203ENST00000491165 PRUNE1Q86TP1 453 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 GIPC2Q8TF65 315 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 C8orf48Q96LL4 319 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 EMILIN2Q9BXX0 1053 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 PRKAG3Q9UGI9 489 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 PRRC2BQ5JSZ5 2229 aaKnown RBP23.53■■□□□ 1.36
USF3-203ENST00000491165 A0A1W2PPC1 479 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 RASA4BC9J798 803 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 GOLGA8SH3BPF8 625 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 RASA4O43374 803 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 NQO1P15559 274 aaKnown RBP23.53■■□□□ 1.36
USF3-203ENST00000491165 PGFP49763 221 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 COPS2P61201 443 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 RPL7AP62424 266 aaKnown RBP23.53■■□□□ 1.36
USF3-203ENST00000491165 BNIP1Q12981 228 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 TMED2Q15363 201 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 BHLHA9Q7RTU4 235 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 KHSRPQ92945 711 aaKnown RBP eCLIP23.53■■□□□ 1.36
USF3-203ENST00000491165 PNPLA8Q9NP80 782 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 KLHL11Q9NVR0 708 aa23.53■■□□□ 1.36
USF3-203ENST00000491165 DNALI1O14645 258 aaPredicted RBP23.52■■□□□ 1.36
USF3-203ENST00000491165 GRAP2O75791 330 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 CALB1P05937 261 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 NR1H3Q13133 447 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 ZFYVE27Q5T4F4 411 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 OR6B2Q6IFH4 312 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 TCEAL8Q8IYN2 117 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 MCRS1Q96EZ8 462 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms