RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 STXBP5Q5T5C0 1151 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 N4BP2L1Q5TBK1 243 aaPredicted RBP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 DENND1BQ6P3S1 775 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 TIFABQ6ZNK6 161 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 GADL1Q6ZQY3 521 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 ZNF410Q86VK4 478 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 GSDMBQ8TAX9 411 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 LRGUKQ96M69 825 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 PDCD2LQ9BRP1 358 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 KCNN4O15554 427 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 SERPINE1P05121 402 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 HNRNPCP07910 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 PSMC1P62191 440 aaKnown RBP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 MSTO1Q9BUK6 570 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 SDCBP2Q9H190 292 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 PCDHA10Q9Y5I2 948 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 ZNF195O14628 629 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 DCXO43602 365 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 STBD1O95210 358 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 TRUB2O95900 331 aaKnown RBP19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 FAM58BPP0C7Q3 252 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 ALOX15P16050 662 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 PRDX6P30041 224 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 NR1H2P55055 460 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 MAP1SQ66K74 1059 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 TSHZ1Q6ZSZ6 1077 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 ZNF554Q86TJ5 538 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 NUP93Q8N1F7 819 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 DEPDC1BQ8WUY9 529 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 LRRC39Q96DD0 335 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 KLC2Q9H0B6 622 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 CYP26B1Q9NR63 512 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 THEGQ9P2T0 379 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 USP18Q9UMW8 372 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 ADGRE1Q14246 886 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 PCLAFQ15004 111 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 CATSPER1Q8NEC5 780 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 RTKNQ9BST9 563 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 STK39Q9UEW8 545 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 PACSIN3Q9UKS6 424 aa19.9■□□□□ 0.78
SNAPC3-206ENST00000490969 LCTP09848 1927 aa19.89■□□□□ 0.78
SNAPC3-206ENST00000490969 H3BSA7 217 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 PLIN3O60664 434 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 ABCD1P33897 745 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 IREB2P48200 963 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 CNTN2Q02246 1040 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 SEZ6Q53EL9 994 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 TICAM1Q8IUC6 712 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 SNRNP27Q8WVK2 155 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 CYTH4Q9UIA0 394 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 GNEQ9Y223 722 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 CEPT1Q9Y6K0 416 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 WDR81Q562E7 1941 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 MAGEB3O15480 346 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 LDHAP00338 332 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 CDH2P19022 906 aaPredicted RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 ARRB2P32121 409 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 GJA5P36382 358 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 CDH6P55285 790 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 COG7P83436 770 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 PPIDQ08752 370 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 C6orf52Q5T4I8 152 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 SLFN12LQ6IEE8 588 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 TMEM126BQ8IUX1 230 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 PRPF31Q8WWY3 499 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 TEX13BQ9BXU2 312 aa19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 SEPT9Q9UHD8 586 aaPredicted RBP19.89■□□□□ 0.77
SNAPC3-206ENST00000490969 DOCK5Q9H7D0 1870 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 TESPA1A2RU30 521 aaPredicted RBP19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 ZBTB14O43829 449 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 GLRA3O75311 464 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 RGS20O76081 388 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 MAGEA6P43360 314 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 MYL6P60660 151 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 MRPS22P82650 360 aaKnown RBP19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 CREB5Q02930 508 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 FSCBQ5H9T9 825 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 ARHGEF16Q5VV41 709 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 LRRC43Q8N309 656 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 MPP5Q8N3R9 675 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 ADCY4Q8NFM4 1077 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 RDM1Q8NG50 284 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 ATP6V0A1Q93050 837 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 GFM2Q969S9 779 aaKnown RBP19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 PHF12Q96QT6 1004 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 EBNA1BP2Q99848 306 aaKnown RBP19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 NIF3L1Q9GZT8 377 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 HOXC10Q9NYD6 342 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 RIMS3Q9UJD0 308 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 AK5Q9Y6K8 562 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 KIAA1217Q5T5P2 1943 aa19.88■□□□□ 0.77
SNAPC3-206ENST00000490969 ATG7O95352 703 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 GRK2P25098 689 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 CNTFP26441 200 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 YWHAEP62258 255 aaKnown RBP19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 TFDP2Q14188 446 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 FAM47CQ5HY64 1035 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 C10orf107Q8IVU9 208 aa19.87■□□□□ 0.77
SNAPC3-206ENST00000490969 RTP4Q96DX8 246 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms