RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 USP39Q53GS9 565 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 TRMT11Q7Z4G4 463 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 CHPFQ8IZ52 775 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 SIX6OS1Q8N1H7 587 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 C1orf216Q8TAB5 229 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 STK32AQ8WU08 396 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 MRGPRX3Q96LB0 322 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 HSD3B7Q9H2F3 369 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 ANLNQ9NQW6 1124 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 ANKRD36A6QL64 1941 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 FOXD2O60548 495 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 TSPAN3O60637 253 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 RHOBTB1O94844 696 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 HLA-EP13747 358 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 GNA15P30679 374 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 GBP1P32455 592 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 CLCN1P35523 988 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 IRX4P78413 519 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 FSCBQ5H9T9 825 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 SPDYCQ5MJ68 293 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 ADGRF1Q5T601 910 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 TRNP1Q6NT89 227 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 BNIPLQ7Z465 357 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 METTL3Q86U44 580 aaKnown RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 C11orf74Q86VG3 221 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 SCUBE3Q8IX30 993 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF366Q8N895 744 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 IPO9Q96P70 1041 aaKnown RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 SLC2A13Q96QE2 648 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 ORAI3Q9BRQ5 295 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 SLC2A11Q9BYW1 496 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 MIS12Q9H081 205 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 UBE2TQ9NPD8 197 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-204ENST00000489898 ELOVL2Q9NXB9 296 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 LRP4O75096 1905 aa12.3□□□□□ -0.44
SRSF4-204ENST00000489898 CABIN1Q9Y6J0 2220 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 EPHB6O15197 1021 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ACSL4O60488 711 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ALDH1A2O94788 518 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 FBXO21O94952 628 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ERBB2P04626 1255 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 TFE3P19532 575 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 SDHBP21912 280 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 CDKAL1Q5VV42 579 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 APTXQ7Z2E3 356 aaKnown RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 SLC47A2Q86VL8 602 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 SYT12Q8IV01 421 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 FAM71AQ8IYT1 594 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF683Q8IZ20 524 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 MLKLQ8NB16 471 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 OR52K2Q8NGK3 314 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 AZIN2Q96A70 460 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF419Q96HQ0 510 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 GANQ9H2C0 597 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ABCB8Q9NUT2 735 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 WSB2Q9NYS7 404 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 TLR6Q9Y2C9 796 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ARID1BQ8NFD5 2236 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-204ENST00000489898 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 C4orf47A7E2U8 309 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 KCNU1A8MYU2 1149 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 KCNK5O95279 499 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 PABPC1P11940 636 aaKnown RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 HOXD12P35452 270 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 LMAN2Q12907 356 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MAN2A1Q16706 1144 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MPPE1Q53F39 396 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 TRIM61Q5EBN2 209 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MS4A13Q5J8X5 152 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MPP7Q5T2T1 576 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 N4BP2L1Q5TBK1 243 aaPredicted RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 LYSMD4Q5XG99 296 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MMS22LQ6ZRQ5 1243 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 FAM183BPQ6ZVS7 135 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms