RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GNG2P59768 71 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 IGBP1P78318 339 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MRPS9P82933 396 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC18A2Q05940 514 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 C19orf57Q0VDD7 668 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 GALNT2Q10471 571 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 GRSF1Q12849 480 aaKnown RBP eCLIP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 TRPC3Q13507 836 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DPYSQ14117 519 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF846Q147U1 533 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DRAP1Q14919 205 aaPredicted RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ABCB5Q2M3G0 1257 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 KLHL38Q2WGJ6 581 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 TMEM119Q4V9L6 283 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC58Q4VC31 144 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MDH1BQ5I0G3 518 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF618Q5T7W0 954 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT79Q5XKE5 535 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 PLEKHA7Q6IQ23 1121 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ISLR2Q6UXK2 745 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC30A10Q6XR72 485 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SETD3Q86TU7 594 aaPredicted RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC51BQ86UW2 128 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CARM1Q86X55 608 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 GALNT13Q8IUC8 556 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CRLF3Q8IUI8 442 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ANKRD13AQ8IZ07 590 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MYO1HQ8N1T3 1032 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MAGEB6Q8N7X4 407 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 HIPK4Q8NE63 616 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RASGRP4Q8TDF6 673 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MZB1Q8WU39 189 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CAPSLQ8WWF8 208 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DPF3Q92784 378 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 FBXL8Q96CD0 374 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CMTM5Q96DZ9 223 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 FAR2Q96K12 515 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 FBXL18Q96ME1 805 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 COG8Q96MW5 612 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RILPQ96NA2 401 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF347Q96SE7 839 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ORAI2Q96SN7 254 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SERPINI1Q99574 410 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DHRS9Q9BPW9 319 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 AIFM2Q9BRQ8 373 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RIOK1Q9BRS2 568 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RAB34Q9BZG1 259 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 OSBPL2Q9H1P3 480 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 TP63Q9H3D4 680 aaPredicted RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 STN1Q9H668 368 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RMND5AQ9H871 391 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ALG13Q9NP73 1137 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC177Q9NQR7 707 aaPredicted RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CHST7Q9NS84 486 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 TAS2R14Q9NYV8 317 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 TBC1D14Q9P2M4 693 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SUCOQ9UBS9 1254 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 RIMS3Q9UJD0 308 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CORINQ9Y5Q5 1042 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DCCP43146 1447 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 AKAP11Q9UKA4 1901 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 AFDNP55196 1824 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-206ENST00000489853 KIF13BQ9NQT8 1826 aa4.9□□□□□ -1.63
SNRNP40-206ENST00000489853 TOPAZ1Q8N9V7 1692 aa4.9□□□□□ -1.63
SNRNP40-206ENST00000489853 NFASCO94856 1347 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MYO3BQ8WXR4 1341 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ARHGEF37A1IGU5 675 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 F5H6K3 240 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PSMD11O00231 422 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HAT1O14929 419 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 WIPF1O43516 503 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CALUO43852 315 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CCNT1O60563 726 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TSPAN1O60635 241 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM155BO75949 473 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CYP1A2P05177 515 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CCDC159P0C7I6 412 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HSPA1AP0DMV8 641 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HSPA1BP0DMV9 641 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KRT3P12035 628 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GZMAP12544 262 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MYL4P12829 197 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TSHRP16473 764 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ZNF26P17031 533 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ATF4P18848 351 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 EIF2AK2P19525 551 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KLRC2P26717 231 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC16A2P36021 539 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CASP5P51878 434 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 AQP5P55064 265 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 P2RX3P56373 397 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 STX1BP61266 288 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CTBSQ01459 385 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FOXD4Q12950 439 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 BNIP3Q12983 259 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PRKG1Q13976 671 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 GRIK5Q16478 980 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 LETM2Q2VYF4 491 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms