RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 THAP4Q8WY91 577 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 AKAP1Q92667 903 aaKnown RBP eCLIP3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 RILPL2Q969X0 211 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 REPS1Q96D71 796 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 ELOVL1Q9BW60 279 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 MRIQ9BWK5 157 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 TMPRSS5Q9H3S3 457 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 CDCP1Q9H5V8 836 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 KCNK9Q9NPC2 374 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 ASIC5Q9NY37 505 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 ARPP21Q9UBL0 812 aaPredicted RBP3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 KCND3Q9UK17 655 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 HEMK1Q9Y5R4 338 aaPredicted RBP3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 LTBP4Q8N2S1 1624 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 ADGRL1O94910 1474 aa3.98□□□□□ -1.77
AC055855.1-201ENST00000489563 H3BNC9 293 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 EIF3FO00303 357 aaPredicted RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 IGLV2-14P01704 120 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 RXRAP19793 462 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 BMP5P22003 454 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SLC8A1P32418 973 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 VPS41P49754 854 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 CLK3P49761 638 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 AGTR2P50052 363 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 CDK7P50613 346 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PAPOLAP51003 745 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 ELLP55199 621 aaPredicted RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 COL10A1Q03692 680 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PDCLQ13371 301 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PFKFB3Q16875 520 aaPredicted RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 CERKLQ49MI3 558 aaPredicted RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 TMEM119Q4V9L6 283 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 FBXO47Q5MNV8 452 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 DGAT2L7PQ6IED9 249 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 KYAT3Q6YP21 454 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SYT13Q7L8C5 426 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 BOLLQ8N9W6 283 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PNLDC1Q8NA58 520 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SRFBP1Q8NEF9 429 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SPPL3Q8TCT6 385 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SDCCAG3Q96C92 435 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 KAZALD1Q96I82 304 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 HIC2Q96JB3 615 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SORCS2Q96PQ0 1159 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PYM1Q9BRP8 204 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 CHODLQ9H9P2 273 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 GAR1Q9NY12 217 aaKnown RBP3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SERGEFQ9UGK8 458 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 FEM1BQ9UK73 627 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 PCDHA10Q9Y5I2 948 aa3.97□□□□□ -1.77
AC055855.1-201ENST00000489563 SPATA31A1Q5TZJ5 1347 aa3.96□□□□□ -1.77
AC055855.1-201ENST00000489563 COL11A2P13942 1736 aaPredicted RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 AGAP5A6NIR3 686 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 MBD3L5A6NJ08 208 aaPredicted RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 CYP3A4P08684 503 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 CYP2D6P10635 497 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 ATF7P17544 494 aaPredicted RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 PCP4P48539 62 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 HMGA2P52926 109 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 FAM3BP58499 235 aaPredicted RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 ACTR2P61160 394 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 GAB1Q13480 694 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 LARS2Q15031 903 aaKnown RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 SMAD1Q15797 465 aaKnown RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 PRAMEF17Q5VTA0 474 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 FBXO42Q6P3S6 717 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 RANBP10Q6VN20 620 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 SYNE3Q6ZMZ3 975 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 CHSY1Q86X52 802 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 TMEM57Q8N5G2 664 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 TRMT61AQ96FX7 289 aaKnown RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 UBXN10Q96LJ8 280 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 ASB2Q96Q27 587 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 TRIM2Q9C040 744 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 PRDM16Q9HAZ2 1276 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 TMLHEQ9NVH6 421 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 ARL8BQ9NVJ2 186 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 ASNSD1Q9NWL6 643 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 RRN3Q9NYV6 651 aa3.96□□□□□ -1.78
AC055855.1-201ENST00000489563 LRRC3CA6NJW4 275 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 C3orf70A6NLC5 250 aaPredicted RBP3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 TMEM232C9JQI7 657 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 SEPT4O43236 478 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 PROP1O75360 226 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 TFRCP02786 760 aaKnown RBP3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 ALDOAP04075 364 aaKnown RBP3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 TK1P04183 234 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 CHRM5P08912 532 aaPredicted RBP3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 NDUFS1P28331 727 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 HOXD12P35452 270 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 RCAN1P53805 252 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 FOXL2P58012 376 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 TAS2R50P59544 299 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 C1QTNF8P60827 252 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 TLE3Q04726 772 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 SLC14A1Q13336 389 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 AWAT1Q58HT5 328 aa3.95□□□□□ -1.78
AC055855.1-201ENST00000489563 FCRLBQ6BAA4 426 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms