RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 SNX16P57768 344 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 RNASE9P60153 205 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 RPL7AP62424 266 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CBX1P83916 185 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 ZNF200P98182 395 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PRKCZQ05513 592 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PTK6Q13882 451 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TERF2Q15554 542 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CCNG2Q16589 344 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CPSF6Q16630 551 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PTPROQ16827 1216 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SOWAHAQ2M3V2 549 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TRIM71Q2Q1W2 868 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 FAM153CQ494X1 144 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CYP27C1Q4G0S4 372 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 FBXO47Q5MNV8 452 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TMEM201Q5SNT2 666 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 AADACL2Q6P093 401 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 RHBDF2Q6PJF5 856 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 ZDHHC24Q6UX98 284 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SCARA5Q6ZMJ2 495 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TMC3Q7Z5M5 1100 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 MRPL41Q8IXM3 137 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 GSPT2Q8IYD1 628 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 HACE1Q8IYU2 909 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PLD6Q8N2A8 252 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 ARFGAP1Q8N6T3 406 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CELF2-AS1Q8N7Q2 184 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CMASQ8NFW8 434 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 OR6P1Q8NGX9 317 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 IPO4Q8TEX9 1081 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SLC35F5Q8WV83 523 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 KBTBD7Q8WVZ9 684 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 NKD2Q969F2 451 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 EXOC4Q96A65 974 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 MAGOHBQ96A72 148 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 MCEEQ96PE7 176 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SLITRK1Q96PX8 696 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PPP1R16BQ96T49 567 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 MRPL45Q9BRJ2 306 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 HERPUD2Q9BSE4 406 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TMEM109Q9BVC6 243 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SEZ6LQ9BYH1 1024 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TRIM55Q9BYV6 548 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 OSBPL8Q9BZF1 889 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 DCLK3Q9C098 648 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 ARHGAP39Q9C0H5 1083 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 DNAI2Q9GZS0 605 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 OSBPL2Q9H1P3 480 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SLC38A7Q9NVC3 462 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 GRHL1Q9NZI5 618 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 WHRNQ9P202 907 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 TUBGCP4Q9UGJ1 667 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 SRRDQ9UH36 339 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 FAM153AQ9UHL3 310 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 GABRQQ9UN88 632 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 PIN4Q9Y237 131 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 DRG1Q9Y295 367 aaKnown RBP5.81□□□□□ -1.48
ATG4A-208ENST00000489247 GIT1Q9Y2X7 761 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 NME7Q9Y5B8 376 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 NFS1Q9Y697 457 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 CDY2AQ9Y6F7 541 aa5.81□□□□□ -1.48
ATG4A-208ENST00000489247 ANK1P16157 1881 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 hCG_1818297A0A087WSY0 165 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 FAM86C2PA6NEL3 165 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 MEIS3P2A8K0S8 358 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 KPNA7A9QM74 516 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 GOLGA8KD6RF30 607 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 F8VP50 259 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 M0QZ92 97 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 NDC80O14777 642 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 DAPK3O43293 454 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 OPA1O60313 960 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 LRCH4O75427 683 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 RPS6KA5O75582 802 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 TOMM70O94826 608 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 CHRNA1P02708 482 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 NUDT17P0C025 328 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 KRT3P12035 628 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 ITIH2P19823 946 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 HOXD10P28358 340 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 RPL9P32969 192 aaKnown RBP5.8□□□□□ -1.48
ATG4A-208ENST00000489247 CDKN2BP42772 138 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 PTPN9P43378 593 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 TNNT3P45378 269 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-208ENST00000489247 TAF6P49848 677 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 ARSEP51690 589 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 BCAT1P54687 386 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 PRMT2P55345 433 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 LILRA4P59901 499 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 PSMC1P62191 440 aaKnown RBP5.8□□□□□ -1.48
ATG4A-208ENST00000489247 MRPS25P82663 173 aaKnown RBP5.8□□□□□ -1.48
ATG4A-208ENST00000489247 CAP1Q01518 475 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 SP3Q02447 781 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 CAV1Q03135 178 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
ATG4A-208ENST00000489247 SERINC3Q13530 473 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms