RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 MMEP08473 750 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 GABRG2P18507 467 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 BCKDHBP21953 392 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 UBXN1Q04323 297 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 SLC26A9Q7LBE3 791 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 FRMD1Q8N878 549 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 IPO4Q8TEX9 1081 aaKnown RBP21.97■■□□□ 1.11
LIME1-207ENST00000489212 SLC20A1Q8WUM9 679 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 SORCS1Q8WY21 1168 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 BPIFA3Q9BQP9 254 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 FUCA2Q9BTY2 467 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 SYNCQ9H7C4 482 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 ELOVL2Q9NXB9 296 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 BCCIPQ9P287 314 aaKnown RBP eCLIP21.97■■□□□ 1.11
LIME1-207ENST00000489212 NOCTQ9UK39 431 aaKnown RBP21.97■■□□□ 1.11
LIME1-207ENST00000489212 USP18Q9UMW8 372 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 STON1Q9Y6Q2 735 aa21.97■■□□□ 1.11
LIME1-207ENST00000489212 EPN2O95208 641 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 SOX5P35711 763 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 IL12RB1P42701 662 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 GABRB2P47870 512 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 RPS24P62847 133 aaKnown RBP21.96■■□□□ 1.11
LIME1-207ENST00000489212 CDK17Q00537 523 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 MPP7Q5T2T1 576 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 SDE2Q6IQ49 451 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 ZNF397Q8NF99 534 aaPredicted RBP21.96■■□□□ 1.11
LIME1-207ENST00000489212 LOXL4Q96JB6 756 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 ERGIC2Q96RQ1 377 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 IRX2Q9BZI1 471 aaPredicted RBP21.96■■□□□ 1.11
LIME1-207ENST00000489212 NAT10Q9H0A0 1025 aaKnown RBP21.96■■□□□ 1.11
LIME1-207ENST00000489212 FAM204AQ9H8W3 233 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 ABCB8Q9NUT2 735 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 THADAQ6YHU6 1953 aa21.96■■□□□ 1.11
LIME1-207ENST00000489212 SYNJ2BP-COX16A0A087WUM0 186 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 LRP3O75074 770 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 DAB1O75553 588 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 APOEP02649 317 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 CHRNB2P17787 502 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 P2RY2P41231 377 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 SNX16P57768 344 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 NOMO3P69849 1222 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 ENPP2Q13822 863 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 EIF4HQ15056 248 aaKnown RBP21.95■■□□□ 1.1
LIME1-207ENST00000489212 MAP7D1Q3KQU3 841 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 C2CD6Q53TS8 623 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 MS4A13Q5J8X5 152 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 OTUD1Q5VV17 481 aaPredicted RBP21.95■■□□□ 1.1
LIME1-207ENST00000489212 KIAA0907Q7Z7F0 614 aaPredicted RBP21.95■■□□□ 1.1
LIME1-207ENST00000489212 PGBD3Q8N328 593 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 GPR161Q8N6U8 529 aaKnown RBP21.95■■□□□ 1.1
LIME1-207ENST00000489212 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.95■■□□□ 1.1
LIME1-207ENST00000489212 HJURPQ8NCD3 748 aaPredicted RBP21.95■■□□□ 1.1
LIME1-207ENST00000489212 ADAM33Q9BZ11 813 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 CIPCQ9C0C6 399 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 ARRDC1-AS1Q9H2J1 176 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 SEMA4GQ9NTN9 838 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 DDIT4Q9NX09 232 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 COX16Q9P0S2 106 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 CALCOCO1Q9P1Z2 691 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 STIM2Q9P246 746 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 PLXND1Q9Y4D7 1925 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 GON4LQ3T8J9 2241 aa21.95■■□□□ 1.1
LIME1-207ENST00000489212 KCNU1A8MYU2 1149 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 LSM8O95777 96 aaKnown RBP21.94■■□□□ 1.1
LIME1-207ENST00000489212 NDUFV2P19404 249 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 GBP1P32455 592 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 CD70P32970 193 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 FMO1Q01740 532 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 ZNF234Q14588 700 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 CCDC6Q16204 474 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 NAA35Q5VZE5 725 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 RAP1GAP2Q684P5 730 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 PMS2CLQ68D20 193 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 ADIPOR2Q86V24 386 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 ERICH1Q86X53 443 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 XYLT1Q86Y38 959 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 ZDHHC17Q8IUH5 632 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 NEK11Q8NG66 645 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 UCMAQ8WVF2 138 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 CPA5Q8WXQ8 436 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 RMDN1Q96DB5 314 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 C18orf8Q96DM3 657 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 LMLNQ96KR4 655 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 BTN2A3PQ96KV6 586 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 PCMTD1Q96MG8 357 aaPredicted RBP21.94■■□□□ 1.1
LIME1-207ENST00000489212 DDX50Q9BQ39 737 aaKnown RBP21.94■■□□□ 1.1
LIME1-207ENST00000489212 SLC6A17Q9H1V8 727 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 MBD1Q9UIS9 605 aaPredicted RBP21.94■■□□□ 1.1
LIME1-207ENST00000489212 GGA2Q9UJY4 613 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 DAAM1Q9Y4D1 1078 aa21.94■■□□□ 1.1
LIME1-207ENST00000489212 TEX33O43247 280 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 PABPC1P11940 636 aaKnown RBP21.93■■□□□ 1.1
LIME1-207ENST00000489212 TFE3P19532 575 aaPredicted RBP21.93■■□□□ 1.1
LIME1-207ENST00000489212 TACR2P21452 398 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 NOS2P35228 1153 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 STAT1P42224 750 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 CDR2Q01850 454 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 CKAP5Q14008 2032 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 ELF2Q15723 593 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 CSRP2Q16527 193 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms