RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DPP6P42658 865 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 PDCLQ13371 301 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 NNTQ13423 1086 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 SYPL2Q5VXT5 272 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 CHST9Q7L1S5 443 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 BEND5Q7L4P6 421 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TMEM110Q86TL2 294 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TAC4Q86UU9 113 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.91■■□□□ 1.42
COL9A3-213ENST00000489045 WFDC5Q8TCV5 224 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 AZIN2Q96A70 460 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TRIM62Q9BVG3 475 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 MKRN2Q9H000 416 aaKnown RBP23.91■■□□□ 1.42
COL9A3-213ENST00000489045 PRDM16Q9HAZ2 1276 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TJP2Q9UDY2 1190 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 GGA2Q9UJY4 613 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 PILRBQ9UKJ0 227 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TLR6Q9Y2C9 796 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 IRAK2O43187 625 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 EPHX1P07099 455 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 PABPC1P11940 636 aaKnown RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 ERCC5P28715 1186 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 ZNF33AQ06730 810 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 HSP90AA4PQ58FG1 418 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 MPP7Q5T2T1 576 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 PEAR1Q5VY43 1037 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 SERPINA13PQ6UXR4 307 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 SLC41A1Q8IVJ1 513 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 AHI1Q8N157 1196 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 SLC39A13Q96H72 371 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 PRICKLE1Q96MT3 831 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 LSM14BQ9BX40 385 aaKnown RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 NUSAP1Q9BXS6 441 aaKnown RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 IRX2Q9BZI1 471 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-213ENST00000489045 TMEM9BQ9NQ34 198 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 DACH1Q9UI36 760 aa23.9■■□□□ 1.42
COL9A3-213ENST00000489045 MOCS2O96007 188 aaPredicted RBP23.89■■□□□ 1.41
COL9A3-213ENST00000489045 PRKCSHP14314 528 aaPredicted RBP23.89■■□□□ 1.41
COL9A3-213ENST00000489045 HOXD12P35452 270 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 KIAA0907Q7Z7F0 614 aaPredicted RBP23.89■■□□□ 1.41
COL9A3-213ENST00000489045 ADIPOR2Q86V24 386 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 PASD1Q8IV76 773 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 HJURPQ8NCD3 748 aaPredicted RBP23.89■■□□□ 1.41
COL9A3-213ENST00000489045 CYB5D2Q8WUJ1 264 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 NDST4Q9H3R1 872 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 POPDC2Q9HBU9 364 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 STIM2Q9P246 746 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 USP36Q9P275 1121 aaKnown RBP23.89■■□□□ 1.41
COL9A3-213ENST00000489045 DNAJC12Q9UKB3 198 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 PCDH15Q96QU1 1955 aa23.89■■□□□ 1.41
COL9A3-213ENST00000489045 CDX4O14627 284 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-213ENST00000489045 NDUFS2O75306 463 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 HLA-EP13747 358 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 CD70P32970 193 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 COPAP53621 1224 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 YWHAZP63104 245 aaKnown RBP23.88■■□□□ 1.41
COL9A3-213ENST00000489045 LMAN2Q12907 356 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 VWA3BQ502W6 1294 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 FNDC3BQ53EP0 1204 aaKnown RBP23.88■■□□□ 1.41
COL9A3-213ENST00000489045 MIIPQ5JXC2 388 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 SLC23A3Q6PIS1 610 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 METTL3Q86U44 580 aaKnown RBP23.88■■□□□ 1.41
COL9A3-213ENST00000489045 TMPRSS6Q8IU80 811 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 WDTC1Q8N5D0 677 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 MYEOVQ96EZ4 313 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 HSPA12BQ96MM6 686 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 CPXM1Q96SM3 734 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 DDX50Q9BQ39 737 aaKnown RBP23.88■■□□□ 1.41
COL9A3-213ENST00000489045 TUBGCP2Q9BSJ2 902 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 PCDHGC3Q9UN70 934 aa23.88■■□□□ 1.41
COL9A3-213ENST00000489045 CFIP05156 583 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 PNMA6AP0CW24 399 aaPredicted RBP23.87■■□□□ 1.41
COL9A3-213ENST00000489045 ENGP17813 658 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 CD6P30203 668 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 PTK2Q05397 1052 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 TAF5Q15542 800 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 DAB2IPQ5VWQ8 1189 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 MBLAC2Q68D91 279 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 CLEC17AQ6ZS10 378 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 CACUL1Q86Y37 369 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 MFN1Q8IWA4 741 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 SIPA1Q96FS4 1042 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 NUCKS1Q9H1E3 243 aaKnown RBP23.87■■□□□ 1.41
COL9A3-213ENST00000489045 ITM2CQ9NQX7 267 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 LMBRD1Q9NUN5 540 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 PLA2G4CQ9UP65 541 aa23.87■■□□□ 1.41
COL9A3-213ENST00000489045 ASCC3Q8N3C0 2202 aaKnown RBP23.87■■□□□ 1.41
COL9A3-213ENST00000489045 NYNRINQ9P2P1 1898 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 TYW5A2RUC4 315 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 FOXN3O00409 490 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 KCNK5O95279 499 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 TRUB2O95900 331 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 IGLV3-25P01717 112 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 APOEP02649 317 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 RPS24P62847 133 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 PITX1P78337 314 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 PTPRNQ16849 979 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 DUOXA1Q1HG43 343 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 MS4A13Q5J8X5 152 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 SMYD5Q6GMV2 418 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms