RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 WHAMMP3Q1A5X7 153 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 ODF2Q5BJF6 829 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 HABP4Q5JVS0 413 aaKnown RBP16.58■□□□□ 0.24
CLDN11-208ENST00000488989 ATAT1Q5SQI0 421 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 ZFYVE27Q5T4F4 411 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 CES5AQ6NT32 575 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 Q6ZNB5 142 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 DDX42Q86XP3 938 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLDN11-208ENST00000488989 SLC13A5Q86YT5 568 aaPredicted RBP16.58■□□□□ 0.24
CLDN11-208ENST00000488989 PYROXD2Q8N2H3 581 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 WBP2Q969T9 261 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 CDX2Q99626 313 aaPredicted RBP16.58■□□□□ 0.24
CLDN11-208ENST00000488989 OSBPL8Q9BZF1 889 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 DCLK3Q9C098 648 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 PRDM16Q9HAZ2 1276 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 XPO7Q9UIA9 1087 aaKnown RBP16.58■□□□□ 0.24
CLDN11-208ENST00000488989 HS3ST4Q9Y661 456 aa16.58■□□□□ 0.24
CLDN11-208ENST00000488989 NUP205Q92621 2012 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 CHD5Q8TDI0 1954 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 PGRMC1O00264 195 aaKnown RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 ACSL4O60488 711 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 HMBSP08397 361 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 CORO1AP31146 461 aaKnown RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 AVPR1AP37288 418 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 MTHFRP42898 656 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 KLF1Q13351 362 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 MS4A13Q5J8X5 152 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 HTR3DQ70Z44 454 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 ZNF572Q7Z3I7 529 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 NPAS3Q8IXF0 933 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 FAM217AQ8IXS0 508 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 ZNF683Q8IZ20 524 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 KIAA1958Q8N8K9 716 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 SMRP1Q8NCR6 262 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 MYLIPQ8WY64 445 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 MS4A14Q96JA4 679 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 RIPOR3Q96MK2 946 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 GUCD1Q96NT3 240 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 RNF157Q96PX1 679 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 HERPUD2Q9BSE4 406 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 APOL5Q9BWW9 433 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 SMPD4Q9NXE4 827 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 GDE1Q9NZC3 331 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 CWC15Q9P013 229 aaKnown RBP16.57■□□□□ 0.24
CLDN11-208ENST00000488989 OR12D3Q9UGF7 316 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 NEU3Q9UQ49 428 aa16.57■□□□□ 0.24
CLDN11-208ENST00000488989 IGLV3-10A0A075B6K4 115 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 FAM72CH0Y354 149 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 H3BRJ5 948 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 LEFTY2O00292 366 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 PDE2AO00408 941 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 LRIG2O94898 1065 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 FGGP02679 453 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 ARL4AP40617 200 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 SLC11A2P49281 568 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 USP4Q13107 963 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 MMRN1Q13201 1228 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 DPYSQ14117 519 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 C5orf22Q49AR2 442 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 ANKRD20A8PQ5CZ79 823 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 PPP6R3Q5H9R7 873 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 FAM72AQ5TYM5 149 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 NADSYN1Q6IA69 706 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 FAM72DQ6L9T8 149 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 Q7L0L9 218 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 FAM72BQ86X60 149 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 PCDH19Q8TAB3 1148 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 ING5Q8WYH8 240 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 SUSD6Q92537 303 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 USP13Q92995 863 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 ZSWIM3Q96MP5 696 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 CSPG4P5Q96PW8 444 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 EPAS1Q99814 870 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 CALN1Q9BXU9 219 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 KIF9Q9HAQ2 790 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 TDP1Q9NUW8 608 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 AGO1Q9UL18 857 aaKnown RBP16.56■□□□□ 0.24
CLDN11-208ENST00000488989 ZNF510Q9Y2H8 683 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
CLDN11-208ENST00000488989 E2F8A0AVK6 867 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 GFRA2O00451 464 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 KRT10P13645 584 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 GOT1P17174 413 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 PAFAH1B1P43034 410 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 CKAP4Q07065 602 aaKnown RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 SIX1Q15475 284 aaPredicted RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 ZNF77Q15935 545 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 FAM133BQ5BKY9 247 aaKnown RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 SLC9A4Q6AI14 798 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 BBS12Q6ZW61 710 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 C14orf80Q86SX3 495 aa16.55■□□□□ 0.24
CLDN11-208ENST00000488989 ARID3BQ8IVW6 561 aaPredicted RBP16.55■□□□□ 0.24
CLDN11-208ENST00000488989 MICALL1Q8N3F8 863 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms