RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 G3BP2Q9UN86 482 aaKnown RBP3.2□□□□□ -1.9
CCDC93-209ENST00000488908 LAMP3Q9UQV4 416 aa3.2□□□□□ -1.9
CCDC93-209ENST00000488908 HPSEQ9Y251 543 aa3.2□□□□□ -1.9
CCDC93-209ENST00000488908 PTGDR2Q9Y5Y4 395 aa3.2□□□□□ -1.9
CCDC93-209ENST00000488908 USP19O94966 1318 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 DOCK7Q96N67 2140 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 GAGE12JA6NER3 117 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 ISM1B1AKI9 464 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 INAFM1C9JVW0 142 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 KLKB1P03952 638 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 PRSS2P07478 247 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 ZKSCAN1P17029 563 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 HSPA6P17066 643 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 HOXD3P31249 432 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 POU5F1BQ06416 359 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 COASYQ13057 564 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 KCNJ12Q14500 433 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 ACOX1Q15067 660 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 Q5PR19 223 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 C9orf57Q5W0N0 161 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 CTU1Q7Z7A3 348 aaKnown RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 IPCEF1Q8WWN9 437 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 URB1-AS1Q96HZ7 61 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 INPP4AQ96PE3 977 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 ACO2Q99798 780 aaKnown RBP3.19□□□□□ -1.9
CCDC93-209ENST00000488908 SELENOOQ9BVL4 669 aa3.19□□□□□ -1.9
CCDC93-209ENST00000488908 SPRY3O43610 288 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 PPP1R3DO95685 299 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 WNT1P04628 370 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 CYP1A2P05177 515 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 BTF3P20290 206 aaKnown RBP3.18□□□□□ -1.9
CCDC93-209ENST00000488908 IGHMBP2P38935 993 aaKnown RBP3.18□□□□□ -1.9
CCDC93-209ENST00000488908 CXCR3P49682 368 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 RASSF2P50749 326 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 DSC1Q08554 894 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 DMWDQ09019 674 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 ZNF672Q499Z4 452 aaPredicted RBP3.18□□□□□ -1.9
CCDC93-209ENST00000488908 C3orf38Q5JPI3 329 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.18□□□□□ -1.9
CCDC93-209ENST00000488908 HMBOX1Q6NT76 420 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 C16orf82Q7Z2V1 217 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 SUN3Q8TAQ9 357 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 FAM227BQ96M60 508 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 B3GNT5Q9BYG0 378 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 C22orf23Q9BZE7 217 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 CHST8Q9H2A9 424 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 MAP6D1Q9H9H5 199 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 AASDHPPTQ9NRN7 309 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 ITGB1BP2Q9UKP3 347 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
CCDC93-209ENST00000488908 FZD10Q9ULW2 581 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 SLC8A2Q9UPR5 921 aa3.18□□□□□ -1.9
CCDC93-209ENST00000488908 A0A1B0GVT2 93 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 CAPN8A6NHC0 703 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 BECN2A8MW95 431 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 SLC16A5O15375 505 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 RGS14O43566 566 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 GLUD1P00367 558 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 IL1R1P14778 569 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 SLC8A1P32418 973 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 PBX1P40424 430 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 STAT6P42226 847 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 GLUD2P49448 558 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 NEK2P51955 445 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 RPS16P62249 146 aaKnown RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 KIF5AQ12840 1032 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 GPS2Q13227 327 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 SF3B4Q15427 424 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 TTC39AQ5SRH9 613 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 OTUD1Q5VV17 481 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 ZNF474Q6S9Z5 364 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 KYAT3Q6YP21 454 aaKnown RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 CREB3L2Q70SY1 520 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 ARMC9Q7Z3E5 817 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 SLC35G2Q8TBE7 412 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 ASB12Q8WXK4 309 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 AIFM3Q96NN9 605 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 RETREG1Q9H6L5 497 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 SPAG4Q9NPE6 437 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 DDX56Q9NY93 547 aaKnown RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 PLEKHB1Q9UF11 243 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-209ENST00000488908 CAPN11Q9UMQ6 739 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 MMP24Q9Y5R2 645 aa3.17□□□□□ -1.9
CCDC93-209ENST00000488908 PLSCR5A0PG75 271 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 SRRM3A6NNA2 597 aaPredicted RBP3.16□□□□□ -1.9
CCDC93-209ENST00000488908 KCNQ3O43525 872 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 TUSC2O75896 110 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 KRT36O76013 467 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 ZBTB11O95625 1053 aaPredicted RBP3.16□□□□□ -1.9
CCDC93-209ENST00000488908 FCGR1AP12314 374 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 DRD1P21728 446 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 MMP8P22894 467 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 AGTR2P50052 363 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 PDLIM4P50479 330 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 CLCN5P51795 746 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 DLX5P56178 289 aa3.16□□□□□ -1.9
CCDC93-209ENST00000488908 SEC61A1P61619 476 aaKnown RBP3.16□□□□□ -1.9
CCDC93-209ENST00000488908 EEF1A2Q05639 463 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms