RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 HS3ST4Q9Y661 456 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 COL6A3P12111 3177 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 F5H5T6 163 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 PI4K2BG5E9Z4 385 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 CREB3O43889 395 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 TSPAN3O60637 253 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 RARAP10276 462 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 TCF3P15923 654 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 TACR2P21452 398 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 CTNNA2P26232 953 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 CTNNA1P35221 906 aaKnown RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 AIF1P55008 147 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 SCAPQ12770 1279 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 HTR4Q13639 388 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 CA9Q16790 459 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 ATP13A4Q4VNC1 1196 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 PPP6R3Q5H9R7 873 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 MS4A13Q5J8X5 152 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 NADSYN1Q6IA69 706 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 RFWD3Q6PCD5 774 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 Q6ZNB5 142 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 HTR3DQ70Z44 454 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 UBL4BQ8N7F7 174 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 TEKT4Q8WW24 435 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 RSAD2Q8WXG1 361 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 ZFYVE19Q96K21 471 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 MAGEB5Q9BZ81 275 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 PLA2G2FQ9BZM2 168 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 MYO10Q9HD67 2058 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 THG1LQ9NWX6 298 aaKnown RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 ZNF510Q9Y2H8 683 aa12.75□□□□□ -0.37
TRAIP-209ENST00000488860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAIP-209ENST00000488860 COL4A2P08572 1712 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 CCDC66A2RUB6 948 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 LRRD1A4D1F6 860 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
TRAIP-209ENST00000488860 ENC1O14682 589 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 GREM1O60565 184 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 SRGAP2O75044 1071 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 ECI2O75521 394 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 LATS1O95835 1130 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 SLC6A4P31645 630 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 CDH6P55285 790 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 MTA1Q13330 715 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 RPS6KA1Q15418 735 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 FAM133BQ5BKY9 247 aaKnown RBP12.74□□□□□ -0.37
TRAIP-209ENST00000488860 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 TRIM68Q6AZZ1 485 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 POLNQ7Z5Q5 900 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 LGI2Q8N0V4 545 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 CD101Q93033 1021 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 BHMTQ93088 406 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-209ENST00000488860 HAPLN3Q96S86 360 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 PSMB7Q99436 277 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 EPAS1Q99814 870 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 CALN1Q9BXU9 219 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
TRAIP-209ENST00000488860 TBC1D14Q9P2M4 693 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
TRAIP-209ENST00000488860 TYW5A2RUC4 315 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 E9PAM4 449 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 ANHXE9PGG2 379 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 H3BRJ5 948 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 SLC9A3R1O14745 358 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 DDX3YO15523 660 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 ATP1A1P05023 1023 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 CD48P09326 243 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 GDI1P31150 447 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 ARL4AP40617 200 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 SGSHP51688 502 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 RWDD2BP57060 319 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 TPI1P60174 286 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 LRRC38Q5VT99 294 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 TPGS1Q6ZTW0 290 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
TRAIP-209ENST00000488860 CIR1Q86X95 450 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-209ENST00000488860 PSTKQ8IV42 348 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms