RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CNGA4Q8IV77 575 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 TC2NQ8N9U0 490 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 RXFP2Q8WXD0 754 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 EXOC4Q96A65 974 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 MYEOVQ96EZ4 313 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 PNKPQ96T60 521 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 ANLNQ9NQW6 1124 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 SLC27A6Q9Y2P4 619 aa19.35■□□□□ 0.69
PTCD3-217ENST00000488801 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 K7EQS6 105 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 KAT7O95251 611 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 F9P00740 461 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 FTLP02792 175 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-217ENST00000488801 MAMLD1Q13495 774 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 FBXO43Q4G163 708 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 MPPE1Q53F39 396 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 MS4A13Q5J8X5 152 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 SFTPA1Q8IWL2 248 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 MAML2Q8IZL2 1156 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-217ENST00000488801 TERB1Q8NA31 727 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 PRSS33Q8NF86 280 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 SELENOOQ9BVL4 669 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 PRMT8Q9NR22 394 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-217ENST00000488801 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
PTCD3-217ENST00000488801 GOLGA6L7A0A1B0GV03 622 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 CHURC1-FNTBB4DL54 471 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 TRIM24O15164 1050 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 ATMINO43313 823 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 PAPSS2O95340 614 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 MOCS2O96007 188 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 TPM1P09493 284 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 MYBL1P10243 752 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 PDGFRAP16234 1089 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 SDC4P31431 198 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 GRIA2P42262 883 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 ADKP55263 362 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 RPL7AP62424 266 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 KDSRQ06136 332 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 NME3Q13232 169 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 C5orf22Q49AR2 442 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 RAB6CQ53S08 254 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 PKN3Q6P5Z2 889 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 RFWD3Q6PCD5 774 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 STRADAQ7RTN6 431 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 NAT16Q8N8M0 369 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 ATP6V0D2Q8N8Y2 350 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 MCEEQ96PE7 176 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 XPO6Q96QU8 1125 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 RAB6CQ9H0N0 254 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 ARHGEF4Q9NR80 690 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.68
PTCD3-217ENST00000488801 PLK2Q9NYY3 685 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 DEC1Q9P2X7 70 aa19.33■□□□□ 0.68
PTCD3-217ENST00000488801 SYNJ2BP-COX16A0A087WUM0 186 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 ANTXRLA6NF34 631 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 RNF40O75150 1001 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 ADCY5O95622 1261 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 CYBBP04839 570 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 APODP05090 189 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 TDGF1P13385 188 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 GPD1P21695 349 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 FECHP22830 423 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 EIF4A3P38919 411 aaKnown RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF143P52747 638 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 HDAC4P56524 1084 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 OGDHQ02218 1023 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 DEUP1Q05D60 604 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF252P-AS1Q0IIN9 211 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 TCF15Q12870 199 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 MTAPQ13126 283 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 SLC18A3Q16572 532 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 C15orf59Q2T9L4 293 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 GRAMD4Q6IC98 578 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 KIAA0907Q7Z7F0 614 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF683Q8IZ20 524 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 SPEM1Q8N4L4 309 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 HJURPQ8NCD3 748 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 FNIP1Q8TF40 1166 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 TRIM11Q96F44 468 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 LMLNQ96KR4 655 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 PRRX2Q99811 253 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 DDX50Q9BQ39 737 aaKnown RBP19.32■□□□□ 0.68
PTCD3-217ENST00000488801 SLC2A11Q9BYW1 496 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 PARVAQ9NVD7 372 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 COX16Q9P0S2 106 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 HCN2Q9UL51 889 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 STARD13Q9Y3M8 1113 aa19.32■□□□□ 0.68
PTCD3-217ENST00000488801 PAGE1O75459 146 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 ABCB4P21439 1286 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 TACR2P21452 398 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 CDC25BP30305 580 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 DGKGP49619 791 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 SH3PXD2AQ5TCZ1 1133 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms